Protein

View in Explore
Genbank accession
QGZ14548.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTANNYSSPLARYAIKEMYSNPGVARQFQLQLTQVSPDVGYINVFQFMGRYIKTPIEREYFLMFNMAGFDGSTWNFKDLLTRVDPVNKWINVAKICKDRGMIIDIYGDDGRLYPRDKCWVMSTYDGQHILAIQKLRAFKYGWEQARYLHCYTVQTDLYNPVTNPDNKDWPRFTSNNGNSVEEKDRMKIIYSEYKNLPGLTSVYLNGYLWNGFPSDSQLLGSETIEITNDPSVWKTETYAIDSLQNFYSIRDETRKLIIHPKKEEGDFLYRYVSDVSFYLVEGKGRGIYLHRNRASNFRQLTHRDFAVDSTLVDDMSNLEDMLKDETRYLRLVYRKNDYAQEMQHESSGVRYLYRMNDQNIVGALVGINSTVEEWKAANLENAETNLYLDRPYGELTHEQAVEAIGYNRATQVLCGTPVSYDPTSGMELDVPPACREHLTLFEYDADGLFLRMRDFAKIRHVLPSPDAHLVEFYPGKPGLRIHMDIGRDTMVVDKNTTPRFYYQKVTTEGNLVGERFYAVEGEHYTFDRETGTVNWGLPSSMFIGMILYNDQTLYKEFTLDHIDNSLSFSVTEEWVQGGMLTDVAPANIMVIMNRRSLIENVDYVVRFPHIYIVNHQYLKADGNDFVLYCSEWSPISDTEPVEQTELGYVTGGVIGHNTRYNIREDRVTRTTIGGKVWDPLKVPVAELHPPSELLNPYNGLPYGVKHWYLPIRDWVPYDLTAGWKEARDQDKRMSDYLTLFARKPEPEVIPSLMDKYRVFSPFMNAVVNQILLGLIELDDLPPGESYSEDYVLRKTAEFQWLLEHDPVTRNYDRRYFAVFPYVQQTMVSVTPKELIFIRRINEVFLQSRVNINGHFEVKHV
Physico‐chemical
properties
protein length:860 AA
molecular weight: 100112,06570 Da
isoelectric point:5,43303
aromaticity:0,12674
hydropathy:-0,45802

Domains

Domains [InterPro]
IPR055617
STR
5–859
IPR055617
QGZ14548.1
1 860
Architecture
STR
STR 5-859 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ14548.1
1 860
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,8524
Central domain 161 849 690 0,2407
C-terminal 850 860 10 0,3259
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-849
C-terminal
850-860

Taxonomy

  Name Taxonomy ID Lineage
Phage Photobacterium phage PDCC-1
[NCBI] 		2664246 Uroviricota > Caudoviricetes > Chimalliviridae > Aphroditevirus > Aphroditevirus PDCC1
Host Photobacterium damselae subsp. damselae
[NCBI] 		85581 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Photobacterium > Photobacterium damselae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ14548.1 [NCBI]
Genbank nucleotide accession
MN562221 [NCBI]
CDS location
range 188651 -> 191233
strand +
CDS
ATGACAGCCAATAACTACAGCAGCCCCTTAGCGCGTTACGCCATTAAAGAGATGTACTCTAACCCTGGGGTGGCTCGTCAGTTTCAATTGCAGCTGACGCAGGTCTCCCCGGACGTTGGGTATATCAACGTCTTCCAATTCATGGGGCGTTATATTAAAACACCGATCGAACGAGAATACTTTTTGATGTTTAACATGGCGGGCTTTGACGGCTCGACATGGAACTTCAAAGACTTACTCACCAGAGTAGACCCGGTGAACAAATGGATTAACGTAGCTAAGATCTGTAAAGATCGCGGGATGATTATCGACATCTATGGAGATGACGGTCGTCTATACCCTAGGGATAAATGTTGGGTGATGTCTACTTATGACGGACAACACATCCTTGCTATCCAAAAACTAAGGGCTTTCAAATACGGTTGGGAACAAGCACGTTACTTACACTGCTATACAGTCCAGACCGATTTGTACAACCCAGTAACTAATCCTGATAATAAAGACTGGCCTCGCTTTACTTCTAACAATGGCAACAGTGTTGAAGAAAAAGATCGAATGAAGATCATTTACAGCGAGTACAAAAACCTTCCAGGATTGACCTCTGTTTATTTGAACGGGTATTTGTGGAATGGCTTCCCTAGTGATAGTCAGCTACTAGGTTCAGAGACCATCGAGATCACCAACGACCCGAGTGTTTGGAAAACTGAGACCTACGCCATTGATTCCCTACAGAACTTTTATTCTATCCGGGATGAAACTCGTAAGCTTATCATCCACCCTAAGAAAGAAGAAGGGGACTTCCTTTACCGTTACGTTTCAGACGTTTCGTTCTACTTAGTGGAAGGAAAGGGACGTGGCATTTACTTGCATCGAAACCGAGCTAGTAACTTCCGTCAGTTAACACACCGAGACTTTGCTGTGGATTCTACCTTAGTGGATGACATGAGTAACTTGGAAGACATGTTAAAGGACGAAACACGCTACTTGCGATTGGTGTATCGTAAAAACGATTATGCTCAAGAAATGCAGCACGAGTCTAGCGGAGTTCGTTATTTGTACCGCATGAATGACCAAAACATCGTCGGTGCGTTAGTAGGAATTAACTCCACGGTGGAAGAGTGGAAAGCAGCCAACCTAGAGAACGCTGAAACTAACCTTTACTTAGACCGCCCTTACGGTGAGTTAACTCACGAGCAAGCGGTGGAAGCGATTGGGTATAACCGAGCAACTCAGGTGTTGTGTGGCACACCCGTTTCTTATGACCCTACTAGTGGAATGGAACTGGATGTACCTCCAGCGTGTCGAGAACACTTGACGTTATTTGAATATGACGCAGACGGCTTGTTCTTAAGAATGCGGGACTTCGCCAAGATACGACACGTGTTACCTTCACCGGACGCTCACCTGGTTGAATTCTATCCTGGGAAACCTGGCTTACGAATCCACATGGATATCGGTCGGGACACGATGGTGGTGGATAAAAACACAACCCCGCGTTTTTATTACCAGAAAGTCACTACCGAAGGTAATTTGGTTGGGGAACGTTTCTACGCGGTGGAAGGGGAACACTACACCTTTGACCGTGAAACTGGTACGGTCAACTGGGGATTACCTAGTTCCATGTTTATTGGCATGATTTTGTACAATGACCAAACGTTGTACAAAGAGTTTACTCTAGATCATATCGATAACTCATTGTCTTTCAGTGTTACCGAGGAATGGGTGCAAGGCGGGATGCTTACTGATGTTGCCCCGGCTAACATCATGGTGATTATGAATCGTCGCTCGTTAATTGAAAATGTCGATTACGTGGTTCGTTTCCCTCACATCTATATTGTGAATCACCAGTACCTGAAAGCTGACGGTAATGACTTCGTACTTTATTGTAGCGAGTGGAGTCCTATTAGTGATACAGAGCCTGTAGAGCAAACTGAGCTTGGTTACGTTACAGGTGGGGTGATTGGTCACAATACTCGCTACAACATCCGAGAGGACCGTGTGACGCGCACTACCATAGGTGGTAAAGTTTGGGATCCACTGAAAGTACCGGTTGCGGAGTTACATCCCCCTAGTGAGTTATTAAACCCGTACAATGGTCTTCCTTATGGTGTGAAACACTGGTACTTACCAATTCGTGATTGGGTTCCTTATGACCTGACAGCAGGATGGAAAGAAGCTCGGGACCAAGACAAACGTATGAGTGATTACTTGACGTTGTTTGCCCGTAAACCAGAACCAGAAGTAATTCCAAGTTTGATGGACAAGTATCGAGTATTCAGTCCCTTTATGAATGCGGTTGTTAACCAGATACTTTTAGGTTTAATCGAACTGGATGACCTACCTCCGGGGGAATCTTACTCGGAAGACTATGTATTGCGTAAAACAGCGGAGTTCCAATGGTTGTTAGAACACGACCCCGTTACTCGCAACTACGATAGACGGTACTTTGCCGTATTCCCTTATGTTCAACAAACGATGGTTTCGGTTACTCCTAAGGAACTCATCTTCATCCGACGTATTAACGAGGTGTTCTTACAAAGCCGCGTTAATATAAATGGACACTTTGAGGTTAAACATGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
de106e73a1ba7837a679e246062dc92f1bc2541c19ade2ba51d0189cfa8ffc41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft genome sequence of Photobacterium phage PDCC-1 Quiroz-Guzman,E. 2021-10-07 — GenBank