Protein

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Genbank accession
WVH05416.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
METRLELVNHLLATVGERRVVSLETGHPSVIQAQQALDSWNKDFQSQGWWFNTNRNVRLSPNNLGEVLLPTEAVSFSVTKHELDYLKPANKAQYVKRGKRLYDAWNNTYILKRTLFADIVIMLDIEDLPQSAASYLKHWAAEQYYTDDDGDMQKADKLAQRTALAFHALKAEQMKVMSTNALDSPAAQQLLYRINNTGVHHRANFVGGRPLA
Physico‐chemical
properties
protein length:212 AA
molecular weight: 24111,01300 Da
isoelectric point:7,95277
aromaticity:0,08962
hydropathy:-0,45566

Domains

Domains [InterPro]
DC_2080
ATT
1–75
DC_2080 DC_1286
IPR033767
TTP
5–153
IPR033767
WVH05416.1
1 212
Architecture
ATT
TTP
RBD
ATT 1-75 | TTP 76-149 | RBD 150-210 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Alfirin
[NCBI] 		3111805 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Agrobacterium sp.
[NCBI] 		361 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVH05416.1 [NCBI]
Genbank nucleotide accession
OR997969 [NCBI]
CDS location
range 32457 -> 33095
strand +
CDS
ATGGAAACAAGACTTGAGCTTGTAAATCACCTGCTTGCCACTGTAGGCGAGCGCCGTGTCGTGTCGCTTGAAACGGGCCACCCGTCCGTCATACAAGCGCAGCAGGCACTAGACAGTTGGAACAAGGACTTTCAGAGTCAGGGCTGGTGGTTCAATACGAACCGTAACGTGCGCCTGTCTCCGAACAACCTTGGTGAAGTATTGCTCCCTACGGAGGCAGTATCGTTCTCAGTTACCAAGCATGAGCTTGACTATCTGAAACCAGCCAACAAAGCGCAGTATGTAAAGCGTGGTAAGCGACTGTATGATGCGTGGAATAACACGTACATACTCAAGCGAACTCTCTTTGCCGATATTGTAATCATGCTGGATATTGAAGACTTGCCGCAATCTGCTGCATCGTACTTGAAGCATTGGGCTGCCGAGCAGTATTATACCGATGACGATGGTGACATGCAGAAGGCCGACAAGCTGGCTCAGCGTACAGCCCTAGCCTTCCATGCCCTCAAGGCAGAGCAGATGAAGGTCATGAGCACGAATGCGTTGGATAGCCCTGCCGCTCAGCAGCTTCTATACCGGATCAATAACACTGGTGTGCACCACCGGGCTAACTTCGTTGGAGGGAGACCCTTAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ddc6f382db1ee22c3bed69570a0c49fccab45db90ae07d454fdde8c6f35eba88
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Seed coating with phages for sustainable plant biocontrol of plant pathogens (of the genera of Pseudomonas, Xanthomonas and Agrobacterium) and influence of the seed coat mucilage Erdrich,S.H., Schurr,U., Frunzke,J. and Arsova,B. 2024-06 — GenBank