Protein

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Genbank accession
XLM56279.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MADQGLLGQSKPAGTTNTLLYGAPIDSSASAVLTIANDGTGAAYDVAIKNYDQKLVVNSASYLLHEGDVVTGYRFALGTAIDSNSGLIPGSGIASADAEKTAKFESFYIPTFTEIDVKDISIRSITVESVSGTFAVGDTLTKGTSPDNTDALIYAVTGGESGTILHIGPSTINGGGTEFTDGDSVSTAGGASATVSTGGIGAANNEFVFSTDGSTFNMYLETALTTFTDRAYRFDVSDSTMTGRDFSISATINGEWGPDNTAGTGDDGTEYTTGKTTNGTPGSASAWIQYDLSQDPNLPSQLYIYDGGTGTAANANYGGSDRFLTLSTDFSYDEIYVYDIAGTWVDNTDSFTAGGTSFTVTSQTAGPYGYVRSYSGTALAVIKGSGSADFAGTDTFQDSPKDGTASRSTVTVSSVSVATTDVEAENYITLNKSLTASNVDRITSLVIGPGERLIVESATQNNMFTLLGFEDASNAFTVRNFTASAGGDG
Physico‐chemical
properties
protein length:489 AA
molecular weight: 50430,95190 Da
isoelectric point:4,05003
aromaticity:0,09407
hydropathy:-0,15337

Domains

Domains [InterPro]
DC_0373
STR
1–484
DC_0373
XLM56279.1
1 489
Architecture
STR
STR 1-484 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage WH25-B
[NCBI] 		3384917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM56279.1 [NCBI]
Genbank nucleotide accession
PQ638372.1 [NCBI]
CDS location
range 152773 -> 154242
strand +
CDS
ATGGCAGACCAAGGACTTTTAGGGCAATCAAAACCCGCAGGAACTACAAATACATTGCTGTATGGAGCACCTATTGATTCATCTGCTAGTGCGGTTCTGACAATCGCAAATGATGGAACTGGTGCTGCATATGATGTAGCAATTAAGAATTATGACCAAAAGTTAGTTGTAAATTCTGCATCTTACCTTTTGCATGAAGGTGATGTTGTTACAGGTTATCGTTTTGCTTTGGGAACGGCTATTGATTCAAATAGTGGATTGATTCCTGGAAGTGGAATTGCATCTGCTGATGCGGAAAAGACAGCAAAGTTTGAGTCTTTTTATATCCCAACGTTTACTGAAATTGATGTAAAGGATATTTCAATTCGTTCAATCACGGTTGAATCTGTTAGCGGTACATTCGCTGTTGGTGATACCCTTACTAAAGGAACTTCTCCAGACAATACTGACGCTCTAATTTATGCCGTTACTGGTGGAGAATCGGGTACAATTCTTCACATTGGACCTTCAACAATCAATGGTGGAGGAACAGAGTTCACTGATGGTGATTCTGTAAGCACTGCTGGTGGTGCTAGTGCAACTGTTTCTACTGGTGGTATTGGTGCTGCTAATAATGAATTTGTTTTCTCTACCGATGGAAGCACATTCAACATGTATCTTGAAACTGCTTTAACTACTTTTACTGATAGAGCATATCGTTTTGATGTTTCTGACTCTACCATGACGGGTAGAGATTTTAGTATTTCTGCAACAATTAACGGTGAATGGGGTCCAGATAATACTGCTGGAACTGGTGATGACGGCACAGAGTATACTACAGGTAAAACAACAAACGGAACCCCTGGTTCTGCTAGTGCATGGATTCAGTACGACTTGTCGCAAGACCCTAACCTTCCCTCTCAACTTTATATCTATGATGGTGGGACAGGAACTGCTGCAAATGCAAACTATGGTGGTAGTGACCGTTTTCTTACATTAAGTACAGATTTCTCTTATGATGAAATTTATGTTTATGATATTGCTGGAACTTGGGTAGATAACACAGATAGTTTTACCGCAGGTGGTACATCTTTCACTGTAACTAGTCAAACTGCTGGTCCATATGGTTATGTTCGTTCTTATAGTGGAACAGCTCTTGCTGTAATTAAAGGTTCTGGTTCTGCTGATTTTGCTGGAACAGATACTTTCCAAGACTCTCCTAAAGATGGTACAGCATCTCGTTCTACTGTAACCGTAAGCAGTGTAAGTGTTGCTACAACAGATGTAGAAGCGGAAAACTATATTACTTTGAACAAGAGTCTTACTGCAAGTAATGTTGATAGAATCACTTCCCTTGTTATTGGTCCTGGAGAAAGATTGATTGTCGAGAGTGCAACTCAGAACAATATGTTTACTCTTCTTGGATTTGAAGATGCTTCCAATGCATTTACTGTAAGAAACTTCACTGCTTCCGCTGGCGGCGACGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a4d27a5cc7ef072460b1fd973c5a729843a64971e20c5f9fd7d4f29c6152a81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4327
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50