Protein

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Genbank accession
CAI3971327.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNPSYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPTGDPYAGMNQVDMTDASWIAAELARQLTATLGPSGWSFQAGTGWILITAPAGDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGSSINDVFFFRNRLGFLSGENVIMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGAYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYIFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88900,51190 Da
isoelectric point:5,65528
aromaticity:0,11139
hydropathy:-0,26881

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
CAI3971327.1
1 808
Architecture
TTP
TTP 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAI3971327.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9914
Central domain 142 340 200 0,3123
C-terminal 341 808 467 0,1723
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage CHF7
[NCBI] 		2686377 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAI3971327.1 [NCBI]
Genbank nucleotide accession
OX359472.1 [NCBI]
CDS location
range 13823 -> 16249
strand -
CDS
ATGGGACTCGTTTCGCAATCCGTCAAGAACCTCAAAGGAGGTATCTCGCAACAACCAGACATCCTTCGGTTCTCCAACCAAGGCGCTCTGCAAATCAACGGGTGGTCATCGGAGACTCAAGGTCTTCAGAAGCGGCCACCGACCACCTTCACCAAGCGACTCCAGAACAAGGGTTTCCTCGGCACCAAGCCGCTGGTTCACCTCATCAACCGGGACGCCCAAGAGCAATACTTTGTGGGCTTCTCTGGGACCGGTCTGGCAGTCTGGGACCTGAAGGGAAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGTGCCAACCCTCGGACTGACCTGCGCCTCATAACTGTGGCCGACTACACCTTCGTGGTGAATCGGAACACCGTGTGCCAGATGGGATCGACCCTGACCAACCCTTCGTACCCACGGCTGGACGGCCGAGCGATCATCAACGTGCGTGGCGGTCAGTACGGTCGAACCTTGTCGATCACAATCAACGGTGACGGCACTGGGTCCAGTCCCCAAGCGTCCATTAAGATGCCCAACGGGTCTGCCGAAAAGGTGCCCACTGGTGACCCATACGCTGGCATGAACCAAGTGGACATGACAGATGCCTCATGGATCGCCGCTGAGCTGGCCCGACAACTGACAGCCACTCTTGGGCCTTCTGGGTGGTCGTTCCAAGCGGGCACCGGGTGGATTCTCATAACGGCACCAGCAGGGGATAACGTGCGTCAGATCGCAACCAAGGACGGCTATGCTGACACCCTGCTCAGTGGGTTCATCTATCAGGTCCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAATCTGCCCGTTCGGGTGACAACTACTGGGTCCAATATGACGCCTCTGGGAAGGTCTGGAAGGAGACAGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACTCCCCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCGTAGGCTCTTCGATCAACGACGTGTTCTTCTTCAGGAACCGCTTGGGTTTCCTCTCGGGTGAGAACGTCATCATGTCCCGCACCTCGAAGTATTTCAATTTCTTCCCGAGCAGCGTGGCGACCCTGAGCGATGACGATCCAATCGACGTGGCCATCTCGCACAACCGCATCTCGATCCTGAAGTACGCTGTGCCGTTCTCTGAGCAGCTCCTGCTGTGGTCCGACCAAGCTCAGTTCGTTCTGTCGAGCAATGGCATCCTGTCGAGCAAGACCATCGAGCTGGACCTGACCACCGAGTTCGACGTGAGCGATGGTGCCCGACCTTATGGGATCGGTCGCGGGGTTTACTTCGCAGCTCCACGGGCCTCCTTCACGTCCCTCAAACGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATACACGGGTCTGGTACTGAGAACTTTGTGAGCATCCTTTCGGACGGCTCGCCAAACAAGGTCTTCATCTACAAGTTCCTGTACCTCGACGAGATTCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGCGATGCGGCCACAACCCGTGTCCTCGCAGCCTCGTGCATTGGCTCCTACTGCTACCTGATGATCGACCGACCAGAGGGACTGTGCCTTGAGCGTATGGAGTTCACGCAACACACCATCGACTATTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGACCATCGTCCTCGGTGCCTACAACATCGACACGAACCTGACTTCGTTCGACGTTCGGACTGCCTACGGTGGAACGCCGGGTCCTGAGTCCACGTTCTACACCATCGACCAGCAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCGTACATCTCGTTCGTGGGCAACCGGGCTGGCGAGCAGATGGTGATCGGAAAGCAGTACATCTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCCACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGCCGTGCGTGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAACGGCTCCAGCGAGTTCGTCTACGTGATGACTGGTGGTCGCCTCGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGTACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTCAACCAACGAGTCACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAGGGTAACTACATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6790ad824000200dfaa989f4df846c7fa158cfdb2012c976707ba1fb8a43e4eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50