Protein

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Genbank accession
WNO25341.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MRKAVSSKAPDCQVKKYVGTSFDEVKIVADNIEDVVKVADNITKIDDVLPHVGNIATVANNIDDVNTVADNIADVKTVASIAPKVSNVSDNMASVVNTSDNMAAVIDAPNQAAAAKAFADAAKVSETNAKTSETNAKLSETNASTSEQNAAASAQAAQASASAASASEQAASTSETNAKQSETNAATGAANALASEQAAKTSETNAALSETNAANSATAAANSATAAATSETNAAASEADAKIYETDANAAKQVAITKADEASANATSAAASEASALQSKTDAESAKLAAIDAQQKSETIYEAFMKGAVYRGGWNPKQTNAYPDPLGINSQWDVWLDVGTPYYDFDGKRWYSGDRLIWSEPDKEFFHITRVAGVLSVNGKTGAVNIAAEDINAINNSSPVLTDLDALFPAGKTVIGRTTGNVSGLQGVRSVLHMPNGLGGFQLAARSQNSEYSIRVAGDNDGLIGTWERLYTTGYKPSANDVGALPITGGTLTGGLSVPNSLYLRSSSTGNNPNFYLRRSDNTNGGIIYIERGDDTLRLNKYTANGSTVENGLIIGASSTESTKNIVVGSAQLNQGNALTRKDYVDGQLNTRLPLSGGTITGTLGIGSSKFLMAGVNMMGAGTDITRFGDGDYLRPMNLNAKDGVVNIINSDGAPAFRVYHEGYKPTPAAIKALEAETGNGRITDLDNLTKAIWGWTDSSAAGRPPSGATHHVLSSSWSNGAYSTQFATRNAEFHVRTKENGVWNNWNTVYHTGNKPTAADVNAVNKTGDVMTGTLAVHGLHAVDAIAADTIKMSGYGVMANRSVMYVHNANSAGKISFGLGGDYGRNVKAEISGNGILSTIPVTVAHDVNVTPSTNHASINMSTAANKSCTIRMREDANKHGAYIQYDGTAANAFVIGTYQDGNATVAVTIPRDNQGVNFEKNIGVKGGLINLASKHQIVGETNGVKLQNVANGKNGWFGARNADWFHIETDTTNGFYSYDNFNIPNLTIRAGMSAVTVGASGTGTNQGFAFNGKTVIGGANDGWIRMNPTGQFASGIYCGGVGLLRHDFAVSAGDATSATVKSSALKASFYEGAWAGDGVAAVSVKQPDSVGAHWALASYYNATNIRAGIQILSNVDGRMRFYTDRRAHYVEVRSGGLLAQGNITAYSDARVKTDLEVIPDALDKVSKLTGYTYKRTDRNDEGRKTGLIAQDVEKVLPEAVITTNREDIGIEDFKAVDYGNMVGLLVEAIKELKAEVESLKKELENGIA
Physico‐chemical
properties
protein length:1251 AA
molecular weight: 131185,49880 Da
isoelectric point:5,54910
aromaticity:0,06635
hydropathy:-0,29073

Domains

Domains [InterPro]
DC_0608
ATT
5–243
DC_0608 DC_0466 DC_0007
IPR030392
CHP
1150–1203
IPR030392 Coil
IPR030392
CHP
1150–1246
IPR030392
WNO25341.1
1 1251
Architecture
ATT
STR
RBD
ATT 5-243 | STR 339-662 | RBD 666-1249 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO25341.1
1 1251
Domain Start End Length (AA) Confidence
N-terminal 1 585 585 0,6459
Central domain 586 784 200 0,1764
C-terminal 785 1251 466 0,8997
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-585
Central
586-784
C-terminal
785-1251

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP-MS02
[NCBI] 		3075130 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO25341.1 [NCBI]
Genbank nucleotide accession
OR102882.1 [NCBI]
CDS location
range 2279 -> 6034
strand +
CDS
ATGAGAAAAGCCGTATCCAGTAAAGCACCTGATTGTCAGGTAAAGAAATATGTTGGTACGTCTTTTGATGAAGTAAAGATTGTTGCCGATAACATCGAAGATGTTGTTAAGGTGGCAGACAATATTACTAAGATTGATGATGTATTACCGCATGTAGGTAACATTGCAACTGTTGCTAATAATATTGATGATGTAAACACTGTAGCTGACAATATTGCAGACGTTAAAACTGTAGCCTCTATTGCTCCTAAAGTTTCTAACGTATCTGACAATATGGCATCAGTAGTTAATACTTCAGACAATATGGCTGCTGTTATTGATGCACCTAACCAAGCTGCTGCCGCTAAAGCTTTTGCGGATGCTGCAAAGGTATCTGAAACTAATGCTAAGACTTCTGAAACCAATGCAAAGCTAAGTGAGACTAATGCCTCTACCTCAGAACAGAATGCTGCTGCGTCGGCGCAAGCTGCACAAGCGTCAGCGAGTGCTGCGTCAGCGTCAGAGCAAGCAGCAAGTACTTCAGAAACAAACGCAAAACAATCAGAAACTAACGCAGCCACCGGTGCTGCTAACGCTTTAGCCTCTGAACAAGCTGCCAAAACTAGTGAGACAAATGCTGCTCTTTCTGAAACCAATGCTGCAAATTCTGCTACTGCTGCTGCCAATAGTGCAACGGCTGCTGCTACATCAGAAACTAACGCTGCTGCTTCTGAAGCTGACGCTAAAATTTATGAAACCGATGCTAATGCTGCAAAACAAGTAGCTATTACTAAAGCTGATGAAGCTAGTGCGAATGCTACAAGTGCTGCTGCAAGTGAAGCTTCTGCATTGCAATCTAAGACTGATGCTGAATCTGCAAAGTTAGCTGCAATAGATGCACAACAAAAATCAGAAACCATTTATGAAGCATTCATGAAAGGTGCTGTTTACCGTGGTGGTTGGAACCCTAAACAAACCAATGCTTATCCAGACCCATTAGGTATTAACTCTCAGTGGGATGTTTGGTTAGATGTGGGCACTCCATACTATGATTTTGATGGTAAGCGTTGGTACTCAGGTGACCGTTTGATTTGGTCTGAACCAGATAAAGAGTTCTTCCATATTACTCGTGTAGCTGGTGTACTTTCTGTTAATGGTAAGACTGGTGCGGTAAATATTGCTGCTGAAGATATTAATGCAATTAATAACTCATCACCTGTATTGACTGACCTTGATGCACTATTTCCGGCAGGTAAAACAGTAATTGGTAGAACTACCGGTAATGTATCTGGTTTGCAGGGTGTACGTTCAGTACTACATATGCCTAATGGTTTGGGCGGTTTTCAGTTAGCAGCTCGCTCTCAAAATTCTGAATATAGTATTCGAGTTGCTGGTGATAATGATGGTTTGATTGGTACATGGGAACGTCTATACACTACTGGATATAAGCCATCTGCTAATGATGTAGGTGCATTACCTATTACTGGTGGTACGTTAACTGGTGGATTGTCTGTACCTAACTCACTATATCTAAGAAGTTCATCTACTGGTAATAACCCTAACTTCTATTTAAGACGTTCAGATAATACTAACGGTGGCATTATTTACATAGAGAGGGGTGATGATACTTTACGTCTTAATAAGTATACAGCAAATGGCTCCACTGTAGAAAACGGTTTGATTATTGGAGCTAGTTCTACTGAAAGTACTAAGAATATTGTTGTCGGTTCTGCTCAGTTAAACCAAGGTAATGCGCTTACTCGTAAAGACTATGTTGATGGGCAACTTAATACCCGCCTACCTCTATCAGGTGGAACTATTACCGGCACATTAGGCATTGGCTCATCTAAATTCCTCATGGCAGGTGTCAATATGATGGGGGCAGGTACAGATATTACTCGTTTTGGTGACGGTGATTACCTACGTCCGATGAACCTGAATGCTAAAGATGGTGTAGTTAATATCATTAATAGTGATGGTGCACCCGCATTTCGTGTATACCATGAAGGTTATAAACCAACTCCAGCAGCTATTAAAGCTCTTGAAGCGGAGACGGGGAATGGTCGTATTACTGATTTAGATAATTTAACTAAAGCTATTTGGGGATGGACTGATAGTAGTGCAGCGGGTAGACCACCATCAGGAGCTACCCATCATGTACTTTCATCTTCTTGGAGTAATGGTGCATACTCTACTCAGTTTGCTACCCGTAATGCTGAGTTCCATGTACGCACAAAAGAGAATGGAGTATGGAACAATTGGAACACTGTTTACCATACCGGTAATAAACCAACTGCTGCTGATGTGAATGCTGTAAATAAAACTGGCGATGTGATGACCGGTACTCTAGCCGTACACGGTTTACATGCAGTGGATGCAATAGCTGCTGATACTATTAAGATGAGTGGTTATGGTGTTATGGCTAACCGTTCTGTTATGTATGTGCATAACGCCAATAGCGCAGGCAAGATTAGTTTTGGTCTAGGTGGTGACTATGGTAGGAATGTTAAAGCTGAAATTAGTGGTAATGGTATTTTATCTACTATTCCAGTAACAGTGGCTCATGATGTTAATGTCACTCCTAGCACTAATCACGCATCTATTAATATGAGTACCGCTGCTAATAAGAGTTGTACTATTCGTATGCGTGAGGATGCTAATAAACACGGTGCTTACATCCAATATGATGGTACTGCTGCTAATGCATTCGTAATCGGTACTTACCAAGATGGTAATGCGACGGTAGCTGTTACTATTCCTCGTGATAATCAGGGTGTGAACTTTGAGAAGAACATTGGTGTTAAAGGTGGTTTGATTAACTTAGCATCTAAACATCAAATTGTTGGGGAAACCAATGGTGTTAAGTTACAGAACGTTGCTAACGGCAAGAATGGATGGTTCGGTGCTCGTAATGCTGATTGGTTCCATATTGAGACAGATACCACTAATGGTTTCTATTCTTACGATAACTTCAATATCCCTAACTTAACTATTCGTGCAGGTATGTCCGCTGTTACTGTTGGTGCTTCAGGTACTGGTACTAACCAAGGTTTTGCATTTAATGGTAAGACAGTTATTGGCGGCGCTAATGATGGCTGGATTCGAATGAACCCGACAGGTCAGTTTGCTTCCGGTATTTACTGCGGTGGAGTTGGTTTACTAAGACATGATTTTGCTGTCTCTGCTGGTGATGCTACCAGTGCTACTGTTAAGTCTTCTGCATTGAAAGCCTCATTCTACGAGGGTGCGTGGGCAGGTGACGGAGTTGCTGCTGTATCAGTAAAACAACCAGATAGTGTTGGTGCTCATTGGGCGTTAGCTTCTTACTATAATGCTACTAACATTCGTGCAGGTATTCAGATTCTTTCTAACGTTGACGGGCGTATGCGTTTCTATACAGACCGTAGAGCCCATTATGTAGAGGTTCGGAGTGGTGGACTCCTTGCTCAAGGCAATATTACTGCTTACTCGGATGCTCGTGTTAAGACTGACTTAGAAGTTATTCCTGATGCTCTAGATAAAGTTAGTAAATTGACTGGTTACACTTACAAACGTACTGACCGTAATGATGAAGGTCGTAAGACTGGTTTGATTGCACAGGACGTAGAGAAAGTATTACCAGAAGCAGTTATTACTACTAATCGTGAAGACATCGGTATCGAAGACTTTAAGGCAGTTGATTACGGTAATATGGTTGGTTTGTTAGTTGAAGCTATCAAAGAACTTAAAGCTGAAGTTGAGTCACTTAAGAAGGAGTTAGAGAATGGCATTGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dbaf4fc33dfea30c773de50a71d541f6fd6e6d3debaa886e8f284c67008cb37e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of three novel bacteriophages infecting fish pathogenic Vibrio spp. Moon,K., Song,S.H., Lee,J.-C., Lee,N., Ryu,S., Lee,S.M., Kim,Y.J., Chun,S.W. and Joo,J.-H. 2025-05-31 — GenBank