Protein

View in Explore
Genbank accession
UZV39771.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,55
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRRPGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFMQEGKEYALLYRRDASTLGSESFAFLYNKTDEAFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTIPSATSTNVWQEQTNIQRLAAWVRSGKYNTTYTVNLTRTDNTVLTVTFKTVTASYPGTLDTSDIPFYLPGGTEPDPAYQKYVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEQLSDLLVDAGVSATYIKGGIVIDDDQFKDITVDDEGDGTTFYAAGQEITDATYAVKFHWHGKIIRVRPSGAGADESYYLRAELENGETSGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPAYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVIGAQNYVNASRSADYLNFWRGSAVTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKNPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITPLTAPNLVMFRTREHPQDFYLYRYEDNKNNGQRVVDSWSKFQYHPALGEIIGVSSYKKNGLVFTARGSLVACDVFDPKGEPDSHACLDSWASFGTPTGVLTASASIAVNSTSPYFLLGCPYAQASDFLTQFDDLDAGALEYGVVSEAVVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVEDTAGMLAAVTTRNSNVTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVRECTYEIRSKDWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91357,21800 Da
isoelectric point:4,83151
aromaticity:0,10432
hydropathy:-0,31019

Domains

Domains [InterPro]
IPR058003
TTP
1–632
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
UZV39771.1
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UZV39771.1
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8873
Central domain 188 390 204 0,3397
C-terminal 391 834 443 0,2896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-390
C-terminal
391-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage NED111
[NCBI] 		2982921 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZV39771.1 [NCBI]
Genbank nucleotide accession
OP548052 [NCBI]
CDS location
range 25073 -> 27577
strand +
CDS
ATGGCAAAGGCAGGCGGAACCTATCCCGACATCCTTCAGGGTGTCAGTCAGAAACCGGCGCACCGTCGTCGGCCGGGCCAGACGCACGAGCAGATCAACGTGCTGTCCGATCCGGTGAACGGCCTCGTGCGCCGTCGTGGTACGCGGTTCGCTGCTTCCCAAGCCGTTGTCACCTCGGCCGAGCTGCGCAACATGGACGTGTTCGACTTCATGCAGGAGGGCAAGGAGTATGCACTGCTGTATCGGCGCGACGCCTCGACCTTGGGAAGCGAGTCTTTCGCGTTCCTCTACAACAAGACGGACGAGGCGTTCATCCCGCTGGTGTACGAGAACAGCACGTGGGTCAATACGCTGGTCAGCGGTGGCGCATCGTCGCTCGCAGCCATCGGCAGCTACGTCTACATCGCGGGCAACACCACGATCCCGTCCGCCACTAGCACGAACGTGTGGCAGGAGCAGACGAACATCCAGCGCCTCGCAGCGTGGGTGCGCAGCGGTAAGTACAACACCACGTACACGGTGAACCTGACGCGGACGGACAACACGGTGCTGACGGTGACGTTCAAGACGGTGACCGCATCGTATCCCGGCACGCTAGACACCAGCGACATCCCGTTCTACCTACCCGGTGGTACGGAGCCGGACCCGGCGTACCAGAAGTATGTCAACGACCGAGTGAACGAGTACAACTCCGCAGTCAACGAGTGGATTGTGACGAGCGCCGAGCAGACGCGCCCGGAGTACATCGCCGAGCAGCTGTCGGATTTGCTGGTCGATGCAGGCGTATCGGCGACGTACATCAAGGGTGGCATCGTGATTGACGACGACCAGTTCAAGGACATCACGGTTGACGACGAGGGCGACGGCACGACCTTCTATGCCGCAGGGCAGGAGATTACCGACGCGACCTATGCCGTCAAGTTCCATTGGCACGGCAAGATCATCCGCGTGCGCCCGAGCGGTGCAGGCGCTGACGAGTCGTACTACCTGCGTGCGGAGTTGGAGAACGGGGAGACTTCGGGCTACGGCTCGGTGGACTGGTATGAAGCGCCCGGCGTGGAGTGCACCATCGACAACCTCGTGTCCCAGCTCTACATCTACAACGGTGTGGGCTACATTGCGCGTAACGGCGCGGGCCTCACGTCTCTGGCTCCGGGCAGCGGTGAGCATCCGGCTTACGGCGCGCGGGTGGCAGGCGACGGGCTGACCTCGCCGATCCCGTGGTTCATCGACAAGCCGATCACGATGCTGTCCGTATTCCAAGACCGGCTGGTGATCGGAGCACAGAACTACGTCAACGCCTCGCGCTCGGCGGACTACCTGAACTTCTGGCGTGGCTCTGCCGTTACCATCGAAGACAGCGATCCTATCGAAATCTTCGCTCACGGTAGCGAGGGCGACGTGCTCCGGCACGCTACGCTCTACAACGGAAACCTCGTGATCTTCGGTGACCGGCAGCAGTATGGCATCAGCGGCGACTCGGTGTTCAGTCCCAAGAATCCACTGATTAAGGCGTTCAGTGCCAACAAGGATTCGGTGGATGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTACGCGCAGTACGGCAGCGAAGGGACGAGCCTGCATCAGATGCGAGTCGGCGCACTCAACGGGCAGCAGACGGTGACGGACGAAATGTCCAACGAGCTGGACTCGTGGCTGTCGGGCACACCGTTGCAGATCACCCCGCTCACGGCACCGAACCTCGTCATGTTCCGCACGCGAGAGCATCCGCAGGACTTCTACCTGTACCGGTACGAGGACAACAAGAACAACGGGCAGCGTGTCGTGGACTCGTGGTCGAAGTTCCAATACCACCCGGCGCTGGGCGAAATCATCGGCGTGAGCAGCTACAAGAAGAACGGCCTCGTGTTCACCGCACGCGGATCGCTCGTGGCGTGCGACGTGTTCGACCCGAAGGGCGAGCCGGACTCGCATGCGTGCCTCGATAGCTGGGCGAGTTTTGGTACACCTACGGGCGTACTGACCGCGAGCGCGAGCATCGCCGTCAATAGCACTAGCCCGTACTTCCTGCTCGGCTGTCCTTACGCTCAGGCGTCCGACTTCCTTACCCAGTTCGATGACCTCGACGCTGGTGCGCTGGAATACGGTGTGGTGTCCGAGGCTGTGGTGATCCCGACCAACCCGTTCCCTCGGGATCAGAATGGTCAGGCCGTACTCGACGGACGCATGTCACTCAACAAGGTGACGGTGGACGTAGAGGATACTGCGGGCATGCTCGCTGCGGTGACCACCCGCAACAGCAACGTGACCACCACGGACTTCGAGGGCCGCATCCTCGGCGACTCCGACAACCTGATCGCGCGGCAACCGGTGTATCGGGGGCAGCTCAACATCAGCGTCGGACGCGAAGTGCGCGAGTGCACCTACGAGATTCGCAGCAAGGATTGGCTCCCGCTCCGGGTGACCGGCCTGAGCTGGACGGGTCAGACTTTCAACAATGTACGGAGGGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e2916d770431469a3929a88c77d3d543571df5857e087cde3f3b437780a39b9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages useful for control of diseases caused by X. euvesicatoria Petrzik,K. and Brazdova,S. 2015-04-10 — GenBank