Protein

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Genbank accession
AZS06261.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MENKALAVTGSKGGGGSPSTPKEAADSLHSVSTIRILLGLGEGEFDISEVSPKTIMLNNTPLQNPDGSWNYPDVRWEVRAGTQTQEPIAGFPAVESETEVGTSLRYGTPWVQSFNNLAINAVSVRIGFPSLFSQDAKTGDVNGTTVRYHIDVQTDGGAFQTVGNFELTGKTTTGNYERSHRIDLPKATTGWQVRVVRDTPDSTSSRLGNDTTMKAYVQIVDAKLRYPHTALLYVEFDAKQFQNIPKISVLTRGRIIRVPNNYDPVSRTYNSTWDGGFKWAWTNNPAWIFYDLCAEPRFGIGKRMQRNGIPMVDKWELYRIGQRCDQMVPDGRGGNGTEPRFTLDVYIASRAEAWQVVNDLAAVFAGMMWWGGGQLNVQSDMPGDIAHIITRASVIGGKIIYNSGSQRNRFSTFVVNYCDPNNHYQDRPAAGQIIDLVKRYGANQLEMTAIGCTRETEAQRRGQWALYTNSFDRTASWKVGIEGLAYRPGQIVALADERLAGRVMGGRVGEGATRQNITTDCKTDAAAGDTFIVRTKSGNIEKQAITKVTQDAAGNSVLFLGVPLSSDVEPDSVFVIDSGQLALQMYRVTSVRYNPEDNNFDCAGVVYMASKYDVIDRGARLDERPISLIDTGTIAAPKNIIITSYEALIQSQRITTMRVDWDAVLGEKTAAGTIGGAVAYEAQWRRNSNDWINIQRTGLTSFEVPGIYEGDYYVRVRAINAGEASSIWADAVMVHLSGRQGDVPAPIGLAAAPLLYGIAWSWAFGPDSDDTLLTELSYRVPGDATERHLTNESYPSTNYQQMGITPGQRVFVRARCQDRMGNLSPWTDWVEGQSNADADDYLAGIASGFLTDKDGQQLTEQLQGNFEMQMQTLLNQGYIIDEQMAQYGNVKAAVAQMKKVQADANRAFAEFQTVVTAQLGEQYATIQQKMTSIFDAETGGEAMYSLNAGVKYNGQYYDAGMVISVVADGAGYRSRIGLNADQFVLLSGQGDVTYSPFSVINGVVFINTALIGKATIDGAQIKDATIRSAHIQDSIQSDTWTNSGGAYGWRISKTQGFQFIGQTSRNVRLDDTGLGIYDSAGIERFKAGFLG
Physico‐chemical
properties
protein length:1091 AA
molecular weight: 119534,30140 Da
isoelectric point:5,25308
aromaticity:0,09441
hydropathy:-0,32392

Domains

Domains [InterPro]
DC_0014
STR
1–1090
DC_0014
IPR053171
Unmapped
2–863
IPR053171 IPR015406
IPR055385
ATT
94–222
IPR055385 IPR032876 IPR013783
IPR003961
STR
636–725
IPR003961
IPR036116
STR
654–731
IPR036116
AZS06261.1
1 1091
Architecture
STR
ATT
STR
ATT
STR
STR 1-93 | ATT 94-222 | STR 223-349 | ATT 350-508 | STR 509-1090 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZS06261.1
1 1091
Domain Start End Length (AA) Confidence
N-terminal 1 508 508 0,9057
Central domain 509 718 211 0,1007
C-terminal 719 1091 372 0,0740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-508
Central
509-718
C-terminal
719-1091

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagS_MED16
[NCBI] 		2499074 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZS06261.1 [NCBI]
Genbank nucleotide accession
MK095605 [NCBI]
CDS location
range 15733 -> 19008
strand +
CDS
ATGGAAAATAAAGCACTGGCTGTCACCGGCAGCAAGGGCGGAGGCGGAAGCCCCAGCACTCCGAAAGAGGCGGCCGATAGCCTGCACTCAGTTTCAACCATCAGGATCCTGCTGGGCCTGGGTGAAGGTGAGTTTGATATCAGCGAGGTGTCACCAAAGACAATCATGCTGAATAACACCCCGCTGCAGAACCCGGATGGATCGTGGAACTATCCCGACGTGCGCTGGGAGGTCCGTGCGGGCACTCAGACCCAGGAGCCTATCGCAGGATTCCCCGCTGTTGAGTCCGAAACTGAAGTAGGCACCAGTCTGCGATATGGCACGCCATGGGTTCAGTCATTCAATAATCTTGCTATCAATGCTGTCAGCGTGCGCATCGGCTTCCCTTCGCTTTTCAGCCAGGACGCGAAGACCGGCGACGTGAATGGCACAACTGTGCGCTATCACATCGACGTGCAGACGGACGGCGGCGCATTCCAGACCGTGGGAAATTTTGAGCTTACCGGGAAGACGACAACCGGCAACTATGAGCGTTCGCATCGCATCGATCTGCCGAAGGCGACCACCGGCTGGCAGGTTCGCGTGGTCCGTGATACCCCTGACAGCACGTCAAGCCGTCTGGGCAACGACACCACGATGAAAGCCTATGTCCAGATCGTAGATGCTAAGCTGCGCTACCCTCACACGGCTCTGCTTTATGTTGAGTTCGACGCTAAGCAGTTCCAGAACATCCCGAAAATCTCCGTCCTGACGCGCGGGCGTATTATCCGCGTGCCGAACAACTATGACCCGGTGTCCCGCACATATAACTCAACCTGGGATGGCGGATTCAAGTGGGCGTGGACTAATAACCCGGCGTGGATTTTTTACGATCTTTGCGCTGAACCACGTTTCGGAATCGGCAAGCGTATGCAGCGGAATGGGATCCCGATGGTCGATAAGTGGGAACTGTACCGAATCGGCCAGCGATGTGACCAGATGGTCCCGGACGGACGCGGCGGCAATGGGACAGAGCCTCGCTTCACGCTTGATGTCTACATCGCAAGCCGCGCCGAAGCCTGGCAGGTGGTAAACGATCTCGCCGCTGTCTTTGCCGGTATGATGTGGTGGGGTGGCGGCCAGCTGAACGTTCAGTCAGACATGCCAGGCGACATCGCGCACATCATCACGCGCGCCAGCGTCATCGGTGGCAAGATCATCTATAACAGCGGAAGCCAGCGCAACCGCTTCTCGACCTTTGTCGTGAACTACTGCGACCCGAACAACCATTATCAGGACCGTCCGGCAGCGGGCCAGATTATCGACCTGGTTAAGCGCTATGGAGCCAATCAGCTTGAGATGACGGCCATTGGCTGCACGCGTGAGACAGAGGCGCAGAGGCGCGGACAGTGGGCGCTGTACACCAACAGCTTTGACCGCACCGCATCATGGAAGGTTGGGATCGAGGGTCTGGCATATCGTCCTGGTCAGATTGTGGCGCTGGCAGATGAGCGACTGGCCGGACGCGTGATGGGTGGTCGTGTTGGCGAAGGTGCTACCCGACAGAACATCACCACGGACTGCAAGACCGACGCAGCAGCCGGGGACACATTCATTGTGCGGACGAAGAGCGGCAACATTGAGAAGCAAGCGATCACCAAAGTTACACAGGACGCAGCAGGAAACAGCGTGCTATTCCTGGGCGTACCGCTGAGCAGCGACGTTGAACCAGATTCAGTATTTGTCATTGACTCCGGGCAGCTGGCGCTGCAAATGTACCGCGTGACGTCAGTACGCTACAACCCGGAGGACAACAATTTTGATTGTGCTGGCGTGGTTTACATGGCGTCAAAATACGACGTGATAGACCGTGGCGCACGACTGGATGAGCGACCAATCAGCCTGATCGATACCGGCACTATCGCCGCTCCGAAGAACATCATAATCACCTCTTATGAGGCTCTTATTCAGTCGCAGCGCATCACAACGATGCGAGTGGACTGGGATGCAGTTTTGGGCGAGAAGACGGCAGCTGGCACCATTGGCGGAGCTGTGGCGTATGAAGCGCAGTGGCGCAGGAATAGCAACGACTGGATCAACATCCAGCGCACCGGCCTGACGTCGTTTGAAGTACCTGGCATCTATGAGGGGGACTATTATGTCCGCGTGCGCGCCATTAACGCAGGCGAGGCTTCCAGCATCTGGGCTGATGCCGTTATGGTTCATCTGTCAGGACGTCAGGGTGACGTACCAGCGCCGATTGGCCTGGCCGCCGCTCCGTTGCTTTACGGTATTGCGTGGTCATGGGCTTTTGGCCCTGACTCTGATGACACCCTGCTGACTGAACTGTCCTATCGGGTGCCGGGTGATGCAACAGAGCGCCACCTGACCAATGAGTCTTACCCATCAACCAACTATCAGCAGATGGGCATCACTCCAGGGCAGCGCGTCTTTGTTCGCGCACGCTGTCAGGACCGAATGGGCAACCTGTCACCATGGACTGACTGGGTAGAAGGTCAGTCAAATGCTGATGCTGATGACTACCTGGCTGGCATCGCAAGCGGATTCCTGACCGACAAAGACGGCCAGCAACTTACCGAACAGCTGCAGGGAAACTTTGAGATGCAGATGCAGACCCTCCTAAACCAGGGTTACATCATTGACGAGCAGATGGCGCAATACGGAAATGTTAAGGCGGCCGTTGCCCAGATGAAGAAGGTTCAGGCAGACGCTAACCGCGCCTTTGCTGAGTTCCAGACCGTAGTGACCGCGCAGCTGGGTGAGCAGTACGCCACGATCCAGCAGAAGATGACCTCCATCTTTGATGCAGAGACGGGCGGCGAGGCAATGTATAGCCTGAATGCCGGGGTTAAATACAACGGCCAGTACTATGACGCAGGGATGGTCATCAGCGTCGTTGCTGATGGAGCGGGCTACCGTTCTCGCATCGGTCTGAATGCTGACCAGTTCGTCCTGCTGAGCGGCCAGGGTGATGTAACATACTCACCTTTCTCCGTGATCAATGGTGTCGTGTTCATCAATACAGCGCTAATCGGAAAGGCTACAATTGACGGCGCGCAGATTAAAGACGCGACCATCAGAAGCGCCCATATTCAGGACTCCATCCAGTCGGATACCTGGACGAACTCAGGCGGCGCTTATGGCTGGCGCATCAGCAAAACGCAGGGCTTCCAGTTCATCGGCCAGACGTCTCGCAACGTCAGACTTGATGACACTGGTCTGGGTATTTATGACTCCGCTGGAATTGAGCGGTTTAAGGCAGGATTCCTTGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0377d811dfb10bd08aeea6941627405d7bbec01b8a1af714c0426bdf21518232
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagS_MED16 Truncaite,L., Simoliuniene,M., Kazlauskas,D., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank