Protein

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Genbank accession
XAG94829.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPANTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAILVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAAGSTPTTTGGVGLGAWISVGDASLRTQLANGNGSLIGIHPQGTLNNVLTVRTPEQYNAVGDGIDDDTSKLKEMLSDINNVPETLPNAAAVNSYMEQVAVKINLTKLYRFTETLYIPPGVSIEMPAPNFFTRECKQGLFYDPVDKNTAAISLMVYRKQPDGSYKLNKDVDYYPTGLDIDNGDAVTCARKIDISNLNLITAPGVKVGVKWIGGAGCTTKGLSIGENTGSDITTARLPRVGLLQSASWGSVHENLRILYKTQGAVFIDSNGGAAVNNAYISRLGNTNGELEQAVYKPAGFTEVGDVAVTQFAGSEVKFNSPIIEQASFDFVHAGRDTDSYGLFMVDKPHIESSGGKKKHSFYLINTSSNVTLSGVGLSGQDPDLDSMYFLKNCPETARNVVRGQMPVSGVKLVRGTGNYPTLVLDCTNMGSQFQFGEVGDIFYIKDVVGVKADTLYIDPVNGNNYNWGTNGTKPIRELTNIAKICQLFRCKSVYLNAGESVITSNTELPMVVFEGPGSLKANSGSSFLIKAGGTLSLIGLSGISTDGGHMFRVSTGEKVNIHTNCSVNAGAAYVVLSEVQGNIEYRQLFYSVNCSKYIGATAGQTIAGVMVKTATRPTGIDAAPVDGNVSLSYKIIGS
Physico‐chemical
properties
protein length:1095 AA
molecular weight: 116593,29530 Da
isoelectric point:4,89647
aromaticity:0,08219
hydropathy:-0,11954

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 DC_1348 G3DSA:2.160.20.130
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
416–481
IPR040775
XAG94829.1
1 1095
Architecture
ATT
ATT
STR
RBD
ATT 4-188 | ATT 278-587 | STR 588-908 | RBD 909-1095
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG94829.1
1 1095
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,9941
Central domain 527 909 384 0,9857
C-terminal 910 1095 185 0,4081
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-909
C-terminal
910-1095

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SF02
[NCBI] 		3141821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG94829.1 [NCBI]
Genbank nucleotide accession
PP706106 [NCBI]
CDS location
range 43200 -> 46487
strand -
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTGCGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGTGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGCCTTGGCCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAACACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACTTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTATACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATGTTACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCATACTGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACTGTAGCTGCTGGCTCAACTCCTACAACAACTGGTGGGGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGATGCTTCTTTGAGAACACAACTGGCAAACGGCAATGGCTCGTTGATTGGAATTCATCCGCAGGGAACGCTAAATAATGTATTAACCGTGCGCACACCTGAACAGTACAATGCGGTAGGCGACGGAATAGATGACGATACTTCAAAATTAAAAGAAATGCTTTCAGACATAAACAACGTTCCTGAAACACTTCCTAATGCTGCGGCTGTAAATTCGTACATGGAGCAAGTAGCAGTAAAAATTAACCTGACCAAGTTATACCGTTTCACAGAGACGCTATACATACCCCCAGGTGTTTCAATTGAAATGCCAGCACCAAACTTTTTTACTCGTGAGTGTAAGCAAGGATTGTTTTATGACCCAGTAGATAAGAATACAGCAGCAATCAGCTTAATGGTGTACCGTAAACAGCCTGATGGTTCATACAAACTCAATAAAGATGTAGATTATTATCCTACTGGGTTAGATATTGATAATGGGGACGCTGTAACATGTGCCAGAAAAATTGATATTAGTAACCTTAACCTGATTACAGCACCAGGTGTAAAGGTTGGTGTTAAATGGATAGGTGGGGCAGGTTGCACTACAAAAGGGTTATCCATTGGGGAGAATACAGGGAGCGATATTACAACAGCAAGACTGCCAAGAGTAGGATTGTTGCAGTCAGCATCATGGGGTTCTGTTCATGAAAATCTACGTATCCTGTATAAAACTCAGGGCGCAGTGTTCATTGACTCTAATGGCGGTGCTGCTGTAAACAATGCTTACATTTCTCGCCTTGGTAATACTAATGGTGAGTTGGAACAAGCGGTGTATAAACCAGCAGGATTTACTGAGGTAGGTGATGTTGCCGTCACTCAGTTTGCAGGTTCAGAGGTTAAGTTTAATAGCCCAATCATTGAACAAGCATCCTTCGACTTTGTTCACGCTGGCCGGGATACTGATTCCTATGGTTTATTTATGGTTGATAAACCCCATATTGAGTCATCTGGTGGGAAGAAAAAACATAGTTTCTATCTTATCAATACCAGTTCGAATGTTACGTTGTCAGGAGTAGGTCTTTCAGGACAAGACCCTGATTTGGATAGCATGTACTTCCTTAAAAACTGTCCAGAAACTGCCAGAAATGTTGTTAGAGGACAAATGCCAGTAAGTGGCGTAAAACTCGTTAGGGGTACTGGTAATTACCCTACATTGGTACTCGACTGTACAAACATGGGAAGCCAATTTCAATTTGGGGAAGTTGGTGACATTTTCTACATCAAAGATGTTGTTGGCGTAAAAGCAGACACTCTTTATATAGACCCAGTGAATGGTAATAATTATAACTGGGGGACCAATGGAACTAAACCTATACGTGAATTAACTAATATTGCGAAAATATGCCAACTTTTTAGGTGTAAAAGTGTTTACCTTAATGCTGGAGAATCAGTTATTACATCTAACACAGAACTGCCGATGGTGGTGTTTGAAGGTCCTGGGAGCTTAAAAGCAAATTCTGGTAGTAGTTTCCTTATTAAAGCAGGTGGCACATTATCACTAATCGGCCTTTCTGGAATATCTACAGATGGTGGTCATATGTTCAGAGTGTCCACAGGGGAGAAGGTAAACATACACACAAACTGTTCAGTTAATGCTGGTGCGGCCTATGTTGTTCTAAGTGAGGTTCAAGGTAATATTGAATACAGGCAATTATTTTATTCAGTAAATTGCTCTAAGTATATTGGTGCAACTGCTGGACAAACTATCGCTGGTGTCATGGTTAAGACCGCAACAAGACCGACAGGAATCGATGCTGCTCCAGTTGATGGTAATGTTTCTCTATCCTATAAAATTATAGGATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3772e429cf0c3f37a28a351127e97182f05504dcdbfbfd5976b023119e3e4c44
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and application of a novel polyvalent bacteriophage SF02 for the control of Salmonella and Escherichia coli O157:H7 in foods Hou,P.-F. 2024 — GenBank