Protein

View in Explore
Genbank accession
QXV85031.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIIYDVTGHKGGGGKQHTPQETPDSLHSLAKIRILLALGEGEFEGITDPNELRQRVYLDGTPIQNADRSENFPGARVEFRPGTQHQDVIHGFSAVESEQTVGVKLENGTPWVRQINDTSLDAVRIRIGIPALYTNEDNGDLVGGRIDYKIVVYTDNADPREFRFAAVGKTMSLYERDHRIELPPNVNTGWRVEVHRITADSTSAKVVNDIQVQSITEIIDARLRYPLTALLFVEFDAKAFQNIPRVSIKCKGRKVLIPNNYDPINHTYSGDWDGTFKRAWTDNPAWHWYDICITERFGLGRRIKPQMLNRYALYQIAQRCDQLVSDGNGGREIRFKNDMYIQSQTDAWTVLKDLAAIFAGMTWWGNQMLNIVSDQPVAAVSHTITNASVIDGRFDYASGSQKTRYSTFAVAYGNSKNHYEDAIATGQRVELVRRHKINRLDITAIGCTRESEAQRRGHWALISNQLDQQVSFKVGMEGLFFIPGSVVAIADTNISGGFETRGGRLLSDPGTRTVLNTDSEITFRPGDKFLVRTDSGNVETREIASVNGNKVTLKTALDADPIPDQPFCVDGNDIQLQKFRITDLEYDDSTSTFSVRGIEYNDSKYDAVDNGARLDPGIFTQVPDGVMKGPESVTITPSQISSQGQLITNVDIVFPPVKDAVVYEIQWRRTSLQNMAIQWGNDWVNIPRTASNGAHIPNVFSGNYQARVRAIGMGEISSPWVSSAITPIEGRLGGLNAPIITNAISGLHQILWKWNHNNAATDISYTELEVRKTGETEWKFLTNVPYPGAEYAQTSLEFGIYQQLRARVADKIGNLSDWSAQFEGQVSDKVDEYMKGLDDEFLTSEDGKHFQEAINTIPQGIYESMLTDAQQLFNARAEYKGIYAEITVAYNVAADAHKAVAQLETLIGTRLDDAEASIHTLQTAQSTHEQAFAQYQQTVAAKFGEQESAIQQVQTATADVAGALAEYKTQVATQFGQQSAAIEQKMTSSFNHAGGSATYSLKAGVTYNGTYYDAGMQLSVVTSGNAVKSRIAFKADQFYIMHPSNGSLSSAFIVDGGQVYIDTARIKDASINFAQITDTLQSNNFVSGSRGWRIQKGGAAEFNEVTARGRLYANSGEFAFNGQNNTVQINGNGVTVNLPGGGRVVLGVF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126986,11660 Da
isoelectric point:5,45281
aromaticity:0,09130
hydropathy:-0,37261

Domains

Domains [InterPro]
DC_0014
STR
1–1149
DC_0014
IPR053171
Unmapped
7–856
IPR053171 IPR015406
IPR055385
ATT
96–222
IPR055385 IPR032876
QXV85031.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-95 | ATT 96-222 | STR 223-343 | ATT 344-495 | STR 496-1149 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV85031.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,9122
Central domain 515 1081 568 0,0333
C-terminal 1082 1150 68 0,8547
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-1081
C-terminal
1082-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TheodorHerzl
[NCBI] 		2851978 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV85031.1 [NCBI]
Genbank nucleotide accession
MZ501107.1 [NCBI]
CDS location
range 16934 -> 20386
strand +
CDS
ATGACGATTATCTACGACGTCACGGGCCATAAAGGCGGCGGTGGCAAGCAGCACACCCCACAGGAGACGCCTGACAGCCTGCATTCGCTGGCTAAAATCCGCATCTTGCTCGCGCTGGGCGAAGGTGAGTTCGAAGGCATTACCGACCCTAACGAATTACGGCAGCGCGTATACCTGGACGGAACACCGATCCAGAACGCCGACCGGTCTGAAAACTTCCCAGGCGCGCGCGTGGAGTTCCGCCCAGGCACGCAGCATCAAGACGTGATTCACGGATTTTCTGCGGTGGAAAGCGAGCAAACAGTGGGCGTAAAACTGGAAAACGGCACGCCGTGGGTGCGCCAGATTAATGACACCAGTCTTGACGCCGTGCGCATTCGAATCGGCATTCCGGCCCTATACACTAACGAAGATAATGGCGACCTGGTGGGCGGGCGCATCGACTATAAGATCGTTGTGTATACGGATAACGCCGACCCGCGTGAGTTCAGATTCGCCGCCGTTGGTAAAACAATGTCGCTATATGAGCGCGACCACCGCATCGAATTACCGCCGAACGTGAATACCGGCTGGCGAGTGGAGGTGCACCGCATAACGGCAGACTCCACATCGGCGAAAGTGGTGAACGATATTCAGGTGCAATCCATCACTGAGATTATCGACGCCCGCCTGCGTTACCCGCTAACCGCGCTGTTGTTTGTGGAGTTCGACGCCAAAGCGTTCCAGAACATCCCGCGCGTGTCCATCAAGTGCAAAGGCCGCAAAGTTCTAATACCGAACAACTACGACCCGATTAATCATACCTATTCCGGGGACTGGGACGGCACGTTTAAACGCGCATGGACGGATAACCCCGCGTGGCACTGGTACGATATTTGTATTACTGAGCGCTTCGGCCTCGGTCGGCGTATCAAACCGCAAATGTTAAACCGGTACGCGCTCTACCAGATTGCGCAGCGCTGCGATCAGTTGGTCAGCGACGGCAACGGTGGTCGAGAAATCCGCTTTAAGAATGATATGTACATTCAGTCACAGACGGATGCCTGGACCGTGCTTAAGGATTTAGCCGCTATCTTTGCCGGTATGACCTGGTGGGGAAATCAGATGTTGAATATCGTCAGTGACCAGCCGGTCGCAGCGGTATCGCACACCATCACCAACGCCTCGGTCATTGATGGTCGATTCGACTACGCGTCCGGTAGCCAGAAAACTCGGTATTCCACATTCGCGGTAGCATACGGCAACTCGAAGAACCACTATGAAGATGCCATTGCTACGGGGCAGCGTGTCGAACTGGTACGCCGCCATAAGATTAACCGTCTGGATATAACGGCGATCGGCTGTACGCGTGAGTCAGAAGCGCAACGACGTGGGCACTGGGCGCTAATCTCCAACCAGCTTGACCAGCAAGTTAGCTTTAAGGTTGGCATGGAAGGACTATTCTTTATTCCGGGTAGCGTAGTCGCGATCGCCGATACAAACATTTCTGGAGGCTTCGAGACACGCGGCGGTCGCCTGTTGTCGGACCCTGGCACGCGTACCGTGCTTAACACTGACAGCGAAATCACATTCCGCCCTGGTGATAAGTTCCTGGTGCGCACCGATAGCGGAAATGTGGAGACTCGCGAGATCGCCAGCGTCAACGGCAACAAGGTTACGCTAAAAACCGCACTGGACGCCGACCCGATTCCTGATCAGCCGTTTTGCGTCGATGGCAACGATATCCAGTTGCAGAAGTTCCGCATCACCGACCTGGAATATGACGACTCTACCAGCACTTTTTCAGTGCGCGGGATCGAGTACAACGATAGCAAATATGATGCCGTTGATAATGGCGCTCGCCTTGACCCTGGCATCTTTACGCAAGTGCCTGACGGCGTAATGAAGGGGCCGGAGTCAGTGACCATCACCCCGTCGCAGATTTCATCGCAAGGCCAGCTAATCACCAACGTGGATATTGTATTCCCGCCGGTGAAGGACGCCGTGGTGTATGAAATCCAGTGGCGACGTACCAGCTTGCAGAATATGGCGATCCAGTGGGGAAACGACTGGGTAAACATCCCCCGCACGGCATCGAACGGCGCTCACATCCCTAACGTGTTCTCCGGTAACTACCAGGCACGCGTCCGCGCAATCGGTATGGGCGAGATTTCGTCCCCGTGGGTGTCGTCCGCTATCACGCCGATCGAAGGTCGTCTCGGCGGGCTTAACGCGCCAATCATCACCAACGCGATTTCGGGCCTCCACCAAATTTTGTGGAAGTGGAACCACAACAACGCCGCGACGGATATCTCTTACACCGAGCTTGAAGTCCGCAAGACTGGTGAGACGGAATGGAAGTTCCTAACCAACGTCCCATATCCGGGGGCGGAGTATGCGCAAACGTCACTGGAGTTCGGCATCTACCAGCAGTTGCGCGCCCGCGTAGCAGATAAAATCGGCAACCTGTCGGACTGGTCGGCCCAGTTTGAAGGGCAGGTGAGTGACAAAGTTGACGAGTACATGAAGGGGCTTGATGACGAGTTCTTGACTTCCGAGGATGGTAAGCACTTCCAGGAAGCTATTAACACGATCCCGCAAGGCATTTATGAGTCAATGCTCACCGACGCCCAGCAGCTATTCAATGCCCGCGCCGAGTATAAAGGGATTTATGCGGAAATCACGGTGGCGTATAACGTGGCGGCGGATGCCCACAAGGCGGTCGCGCAACTTGAGACGTTGATCGGCACTCGTCTTGACGATGCAGAAGCGTCGATCCACACGTTGCAGACCGCGCAAAGCACGCATGAACAAGCGTTCGCCCAGTATCAACAAACTGTTGCCGCTAAGTTCGGGGAGCAGGAATCAGCCATCCAGCAGGTACAAACGGCAACGGCAGACGTAGCGGGAGCGCTGGCGGAGTACAAGACCCAGGTAGCGACACAGTTCGGTCAGCAGTCCGCCGCGATCGAGCAGAAGATGACGTCTTCGTTTAACCATGCTGGTGGTAGCGCCACCTACAGCCTTAAGGCGGGCGTGACGTATAACGGGACTTACTATGATGCCGGTATGCAGCTTTCCGTCGTGACGTCGGGCAACGCAGTTAAATCTCGTATTGCGTTCAAGGCCGACCAGTTCTACATTATGCACCCGTCGAATGGGTCGCTTTCGTCCGCGTTTATCGTTGACGGCGGTCAGGTGTATATTGACACGGCGCGCATCAAGGACGCGTCCATCAATTTCGCGCAGATCACGGACACGCTGCAATCAAATAACTTCGTTTCGGGGTCACGCGGCTGGCGTATCCAGAAAGGCGGCGCTGCGGAGTTTAACGAAGTAACGGCCCGCGGCAGGCTGTACGCTAACAGTGGTGAGTTCGCTTTTAACGGACAAAATAACACCGTGCAGATTAACGGGAATGGGGTTACAGTTAACCTACCCGGAGGGGGAAGGGTTGTATTAGGTGTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b15a16c46a1f42306a3ef757d2702352835853fd76402c7ff466311729cd8ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank