Protein

View in Explore
Genbank accession
YP_006906653.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MWYREGTITFTQGSDTLTGTGTFWNVTANGVLPGMIVIGPDNKLYEIKRVISDTSLILAEPYTGETQTDVPCRIITTYEGDLTQFSARFTALMTRMSADSKTMRTWLTAVDEVTLEREDGTEVTVKSLAQIVDEHNANQKWYTDNADVINAAGDKAREAAGSAAAAAESANTASTKATEASQSAAAAATSENAADASASAAKTSETNAESFKVDAAASAATASTKATEAGESATSAAASKDAAKASEAQAATSASEASASASAASDSAAAAKTSETNASASEQAAAGSAADALASKNAANESEIHAASSAGESVASAAAAKASETNADASQKAAAGSESAAGLSAEAAANSATASGEYADAALASKEAAALSAGEAKKSETSAAASATTAADSLAGIEVKANEAAESAVLASKKATEASTSAGEAKISQTKAKESEDKAYEYAQNAQSSVASVKWKGTSAEMDLTTDSPKWVKISRARMPQSTSTVYIEVIGGAGYEAGQPELAAMADIVLRTAAGDPKSVNAVAYRTMESAVLSVATVNTSDDNYDIYLKAGAGSQKLVVNLQSAGATVETLEVLEVVDALPEDTVEGTVYHRVISDQDGSITGSLVGNASTATVLQTARRIGGVSFDGSADINLPGVNIQGNQNTTGNAATATKLQTPRTINSVTFDGSADIAIPTLVSRGPITALEGHAQGALPGIQMYEAYNNGYPTTYGNILHMKGAGAVGEGELLVGWSGTDGAHAPVYVRSRRDTSTANWSGWAQVYTTAHKPTAKDVGAAQAFSASYSTGAGNWTTAEFIAWLKERGAFEVPYWMMKGSWSYADNKIITDTGVGNICLAGSVVEVLGNEGAMTIRVTTPTTTTGGGIACAQFTYINHGSAYSPAWRRDYNTTLKPTAADVGAFPISGGSLSGGITASGELQVTSAKTDGGQFRAVHGNYGFFIRNDGANTYFLLTDSGNAYGGWNGLRPLTINNVTGRASISNGIDIGGGATINGSVGLGVANGLGGNSIVLGDNDTGFKQNGDGILDVYANSAHVFRFINSTLQSLKPLSVTGDITSSAWVYANRFSINSSSGAWIDMRNQNVIFGRNAVSTSSAQALLRQDHADRKFFLGGLGNSQFGFYMINNSRTANGTDANAYLQNDGTWVCGGNGSFNDVYIRSDRRSKRNIRKIERALDKLERVEGVLYEIQVCDRYEQSGGLIAQDVQNVQPELVTVDHNDQSGEPRLRLNYNGVIGMLVEAVKELREEVRELRGEISVLKGGN
Physico‐chemical
properties
protein length:1260 AA
molecular weight: 130426,71810 Da
isoelectric point:4,88340
aromaticity:0,06429
hydropathy:-0,24175

Domains

Domains [InterPro]
DC_0162
STR
1–232
DC_0162 IPR051934 IPR048390 DC_0482 IPR030392 Coil
DC_2005
STR
406–782
DC_2005 DC_0482
IPR030392
CHP
1158–1253
IPR030392
Coil
Unmapped
1159–1179
Coil
YP_006906653.1
1 1260
Architecture
STR
STR
ATT
RBD
STR 1-232 | STR 406-782 | ATT 868-970 | RBD 1019-1260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SSU5
[NCBI] 		1177632 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
[NCBI] 		99287 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006906653.1 [NCBI]
Genbank nucleotide accession
NC_018843.1 [NCBI]
CDS location
range 21994 -> 25776
strand +
CDS
ATGTGGTACAGGGAAGGTACTATCACATTTACACAGGGGAGTGACACACTCACCGGCACTGGTACGTTCTGGAACGTTACCGCGAATGGTGTGCTGCCGGGCATGATTGTCATTGGCCCTGACAACAAATTGTACGAAATTAAGCGCGTAATCAGCGACACAAGCCTGATTCTCGCGGAGCCGTACACGGGCGAGACCCAGACGGACGTTCCGTGCCGCATCATCACAACCTATGAAGGCGACTTAACGCAGTTCAGCGCACGCTTTACCGCGCTCATGACCCGAATGTCAGCCGACTCGAAGACGATGCGCACCTGGTTGACGGCAGTTGATGAGGTAACGCTTGAGCGTGAAGACGGTACGGAAGTGACCGTGAAGTCGCTGGCGCAGATCGTCGATGAGCATAACGCAAACCAGAAATGGTATACGGATAACGCCGACGTTATCAATGCCGCTGGCGACAAGGCCAGGGAAGCTGCTGGCAGTGCCGCGGCCGCTGCGGAAAGCGCCAATACAGCGTCTACCAAAGCCACCGAAGCAAGCCAGAGTGCTGCCGCAGCTGCTACATCAGAAAACGCTGCCGATGCAAGCGCTTCCGCCGCAAAAACGTCTGAAACCAATGCTGAGAGCTTCAAGGTAGATGCTGCTGCGTCTGCCGCGACAGCGTCTACCAAAGCGACTGAAGCGGGAGAATCAGCCACGAGTGCCGCGGCATCCAAAGATGCGGCGAAAGCATCTGAAGCACAGGCTGCGACCAGTGCATCCGAAGCCTCTGCTTCAGCGTCTGCTGCGTCTGACTCTGCTGCTGCTGCAAAAACCTCTGAAACCAATGCCTCTGCCTCAGAGCAGGCCGCCGCTGGTAGTGCAGCTGATGCGCTGGCTTCGAAAAATGCGGCTAACGAGTCAGAAATTCATGCTGCTTCGAGCGCCGGGGAGTCGGTGGCCAGTGCTGCTGCGGCCAAAGCTTCAGAAACCAACGCCGACGCATCGCAGAAGGCTGCTGCTGGGAGTGAATCTGCCGCAGGTCTGAGTGCCGAGGCTGCGGCTAATAGCGCTACGGCGTCTGGCGAATACGCTGATGCTGCGTTAGCAAGCAAAGAAGCCGCTGCATTGAGCGCAGGTGAAGCTAAGAAGTCAGAGACGAGTGCAGCTGCGTCGGCAACAACAGCGGCAGATTCTCTGGCTGGGATAGAAGTCAAAGCGAATGAGGCAGCTGAGTCCGCTGTGCTCGCATCGAAGAAGGCAACCGAGGCGTCAACCTCCGCGGGTGAAGCCAAAATATCCCAAACAAAAGCGAAAGAGTCTGAGGATAAGGCGTATGAGTATGCTCAGAATGCCCAATCAAGTGTAGCGAGCGTGAAGTGGAAAGGGACTTCCGCAGAGATGGACCTAACTACCGATTCGCCTAAATGGGTGAAGATTTCGCGCGCACGTATGCCTCAGTCGACCAGCACCGTATACATCGAAGTGATTGGCGGGGCAGGGTACGAAGCCGGGCAGCCAGAGCTTGCTGCAATGGCCGATATCGTGTTGCGAACTGCTGCAGGCGATCCGAAATCGGTGAATGCGGTCGCTTATCGCACTATGGAATCGGCCGTGCTGTCGGTAGCTACCGTTAACACGTCTGACGACAACTACGATATTTACCTCAAAGCAGGTGCTGGCTCTCAGAAGCTGGTCGTCAACCTGCAATCAGCCGGTGCGACGGTCGAAACTCTGGAAGTACTGGAAGTTGTGGATGCGCTGCCTGAAGACACTGTCGAGGGGACTGTCTACCATCGCGTCATTTCCGATCAGGATGGCTCCATTACCGGTTCGCTGGTGGGTAATGCCAGCACTGCGACCGTACTTCAAACCGCCCGCCGTATTGGTGGGGTAAGCTTTGATGGCTCTGCCGATATCAATCTGCCTGGCGTTAACATCCAGGGCAATCAGAACACGACGGGCAATGCTGCTACTGCAACCAAATTACAAACGCCGCGGACAATCAACAGCGTAACGTTCGATGGCTCTGCTGACATTGCTATCCCGACGCTGGTGTCTCGTGGACCTATTACTGCACTGGAGGGTCATGCCCAGGGCGCACTGCCGGGTATTCAGATGTACGAAGCCTACAACAATGGCTACCCGACAACCTACGGCAACATCTTGCATATGAAAGGTGCAGGAGCGGTTGGTGAGGGCGAGCTACTTGTCGGCTGGAGTGGAACAGATGGTGCTCATGCGCCGGTTTATGTTCGTTCACGCCGTGATACTTCGACAGCAAACTGGTCTGGTTGGGCGCAGGTCTACACTACTGCTCATAAACCCACAGCGAAAGATGTTGGGGCCGCGCAAGCTTTTAGCGCATCGTACAGCACAGGGGCTGGCAATTGGACTACCGCTGAATTTATCGCATGGCTAAAGGAGCGTGGTGCCTTCGAAGTACCATACTGGATGATGAAAGGTTCCTGGTCATATGCCGACAATAAAATTATCACTGATACAGGTGTCGGCAATATCTGTCTTGCTGGTTCGGTTGTCGAGGTTTTAGGTAACGAAGGTGCAATGACCATTCGAGTTACTACGCCTACAACGACGACAGGTGGTGGGATTGCCTGTGCTCAGTTCACCTATATTAATCACGGTAGCGCGTATTCCCCTGCCTGGCGCAGAGATTACAACACGACTCTCAAGCCAACAGCGGCAGATGTTGGCGCATTCCCGATTTCTGGCGGTTCACTCTCTGGCGGAATCACTGCATCCGGAGAACTCCAGGTCACTTCGGCAAAAACAGATGGAGGCCAATTCAGAGCTGTACATGGGAACTACGGTTTCTTTATCCGCAACGACGGTGCAAATACCTATTTTCTTCTTACCGATTCTGGCAATGCATATGGTGGTTGGAATGGTTTACGCCCTTTAACTATCAACAATGTCACTGGCCGTGCTTCTATATCAAACGGAATTGATATCGGTGGTGGGGCAACCATCAACGGAAGTGTGGGGTTGGGGGTTGCAAACGGGTTAGGCGGTAATTCAATCGTTCTTGGCGATAATGATACCGGCTTTAAACAGAACGGAGATGGAATTCTGGATGTTTACGCCAACAGTGCTCATGTTTTTAGGTTCATTAATAGCACGCTGCAAAGTCTTAAGCCGTTGAGTGTAACGGGTGACATCACGTCAAGTGCGTGGGTTTACGCCAACCGTTTTTCCATCAACAGCAGTTCTGGCGCGTGGATCGATATGCGTAACCAGAACGTCATCTTCGGGAGGAACGCTGTAAGTACAAGCTCTGCACAAGCGTTGTTGAGACAAGACCATGCGGATCGCAAATTCTTCTTGGGTGGCTTGGGAAACAGTCAGTTTGGTTTTTACATGATCAACAATTCACGTACCGCAAACGGCACGGATGCGAACGCATACCTCCAGAATGATGGTACTTGGGTTTGTGGCGGTAATGGCAGCTTTAATGACGTTTATATCCGCTCTGACCGTCGTAGCAAACGTAATATTCGCAAGATTGAACGGGCGCTCGACAAGCTGGAGCGGGTCGAAGGTGTTCTGTACGAGATTCAGGTCTGTGACCGTTATGAGCAGTCTGGTGGCCTCATCGCTCAGGACGTCCAGAATGTTCAGCCTGAACTAGTAACGGTTGACCATAACGATCAGTCCGGAGAGCCTCGTCTGCGTCTGAACTACAACGGCGTTATCGGTATGTTGGTCGAGGCTGTGAAGGAGTTACGTGAAGAAGTGCGCGAACTCCGTGGAGAAATATCTGTTTTAAAGGGAGGTAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6445ef6e84d7de6fa886e164bb08218e0e68cbb4fff25c618dfc66a523c30d58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5594
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50