Protein

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UniProt accession
A0A8S5UUF1 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MRWSDCGGPPYNNPPYYLSAYGLAVKHGFKGTEEEYLASLKGETGETGPTGPTGAQGPTGPIGETGPTGPVGPTGAAGAAGPTGPTGAPGQTGPAGEAGPTGPTGPTGETGATG
Physico‐chemical
properties
protein length:114 AA
molecular weight: 10768,50440 Da
isoelectric point:4,51838
aromaticity:0,06140
hydropathy:-0,61842

Domains

Domains [InterPro]
DC_0620
STR
7–114
DC_0620
IPR050149
Unmapped
27–111
IPR050149
IPR008160
STR
42–91
IPR008160
A0A8S5UUF1
1 114
Architecture
STR
STR 7-114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctIpM11
[NCBI] 		2825240 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF98111.1 [NCBI]
Genbank nucleotide accession
BK016142 [NCBI]
CDS location
range 21647 -> 21987
strand +
CDS
ATGAGGTGGAGTGACTGCGGCGGACCGCCGTACAACAACCCTCCCTACTACCTTTCGGCCTACGGCCTTGCGGTGAAGCACGGCTTCAAGGGAACGGAGGAGGAATACCTGGCATCCCTGAAGGGAGAGACCGGGGAGACGGGTCCCACCGGACCCACGGGAGCACAGGGGCCGACAGGTCCCATTGGAGAAACCGGACCAACTGGGCCGGTTGGACCGACAGGCGCGGCCGGAGCGGCGGGTCCCACCGGCCCCACAGGAGCCCCGGGGCAGACAGGCCCCGCCGGAGAAGCAGGGCCAACGGGACCGACAGGCCCGACAGGAGAAACCGGAGCCACAGG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
ec04e6756fd8d3b4bf06e1318abad11b72862323f58ac4d4eeb3cf3ce4451805
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5027
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50