Protein

View in Explore
Genbank accession
WBK39931.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MAVTNPATKSEIVTLDGVVTRLPIEFDYRDASHVKLRIIDSAGIAGDVTQGESEDFTVDLATDEVVLNDPYLEGSPFQDTYQALVYRDVPSTREVDFVQLGRFNPDVLDDDLDRAVMRDQQIVESSERSIQLDITDSGGSLILPTTTARANTFLSFDSDGNIETSPGPAPRQWNQFFEYEQGAVDVISYQGQIYKLIVATDTGTEPGTDSSIWEPLVDHGVWTADVTYPVGALVSYSGSLFVALLENKAQTPAGGTSDTNWDKINTAGSSWDTSVIYSTNNIVERNGVLYRSLADNNSGNDPELTLDVSWEEVRTGGGVDADITAGEDITVSGNPLLVQVSTDGKVYKANKTSAAPVIGFVSETVLTDADIRVSNQGIVEGFTGLTAGTEYFMGTDGALVEEGGLVAADNKVSVGFAMSATSMFVMIRKVDPIQANNGIPIGGVNFFATNTAPTGWLSCDGSAVSRTTYSALFAAIGTTFGAGDGSTTFNLPDPREAALIATGTNTTHTIASNNPLALGDFQDDQLEDHKHINYVPSKDTGGMYGNAGTSNNNYWLDPGFATGQNNALPLTSDPYSGRTGTTTHGKQFGLLACIKALEVTGAGDLVLAPVPVYDSGWVANSDWTTMAVPFDYSSISGLAGLTIAELDVDLYISPSGENSNAFDFKLANNSGASTGPRGVTFGQTGTDEISLFTGDNGILYISSIGTAAAIDNESWYYRIIIKPKVHTDLAILQNNGGYNYEERHDISTTGVQVDLSSLWLQPDGFIASYAWTGGDGTAQITFDGGTYTGKFIEIVDTVDVIAADTFFAGIAYSSFGRLTLRKKSNTTLILQEYPTVTVQMSAQSSGAAGKVLYGNTQKDDYSMYSSGDITVPISGTYIVNATVFGNAATIGVYNGTAFQFGEYISTNGTYGNFAITLTLTAGDVIYVNSGNTVSAASGSSMSVTRVG
Physico‐chemical
properties
protein length:947 AA
molecular weight: 100365,29670 Da
isoelectric point:4,16496
aromaticity:0,09398
hydropathy:-0,10834

Domains

Domains [InterPro]
DC_1934
STR
122–218
DC_1934 IPR003610 IPR003610 DC_1872
G3DSA:2.10.10.90
STR
221–312
G3DSA:2.10.10.90 IPR037053
G3DSA:2.10.10.90
STR
221–315
G3DSA:2.10.10.90 SSF88874
IPR011083
ATT
442–496
IPR011083
WBK39931.1
1 947
Architecture
STR
RBD
ATT
STR
RBD
STR 122-315 | RBD 337-429 | ATT 430-496 | STR 497-577 | RBD 578-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBK39931.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 612 612 0,6631
Central domain 613 811 200 0,2428
C-terminal 812 947 135 0,9731
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-612
Central
613-811
C-terminal
812-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacteraceae phage LS06-2018-MD07
[NCBI] 		3003840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39931.1 [NCBI]
Genbank nucleotide accession
OP947163.1 [NCBI]
CDS location
range 38304 -> 41147
strand -
CDS
ATGGCTGTTACCAACCCCGCGACGAAATCCGAGATTGTAACCCTCGACGGAGTGGTCACACGACTGCCTATCGAATTCGACTATAGGGATGCTTCCCACGTAAAGCTGCGGATCATCGACTCCGCCGGTATTGCCGGCGATGTTACTCAGGGGGAATCTGAGGATTTCACCGTGGACCTTGCGACGGACGAGGTTGTCCTGAATGACCCGTATCTCGAAGGGAGCCCCTTCCAGGACACCTACCAGGCCCTGGTTTACCGGGATGTTCCCAGTACCAGGGAAGTGGATTTTGTTCAGCTTGGGCGATTCAACCCCGACGTTCTGGACGATGACCTTGACCGCGCTGTCATGCGGGACCAACAGATCGTTGAATCTTCGGAGCGGAGTATTCAGCTTGACATCACCGACTCAGGCGGGTCTCTTATCCTGCCGACAACCACCGCCAGGGCAAACACTTTCCTGAGCTTTGATTCCGACGGTAACATTGAGACTTCTCCCGGCCCGGCCCCAAGGCAGTGGAACCAGTTCTTCGAGTATGAGCAGGGCGCTGTGGACGTAATTTCTTACCAGGGACAGATATACAAGCTGATCGTCGCAACCGATACCGGGACTGAACCCGGAACAGACAGCTCTATCTGGGAGCCGCTGGTAGATCACGGCGTATGGACCGCAGACGTGACATACCCTGTGGGAGCGCTGGTATCCTATTCTGGATCGCTGTTCGTTGCGCTCCTGGAAAACAAAGCACAGACCCCTGCCGGCGGAACCTCAGACACCAACTGGGACAAGATCAACACCGCTGGATCTTCCTGGGATACCTCGGTCATCTATTCCACCAACAACATAGTAGAGCGAAACGGCGTACTGTACCGATCCCTTGCGGACAATAACTCGGGCAACGACCCTGAGCTTACCCTGGATGTATCCTGGGAGGAAGTAAGGACCGGCGGAGGCGTAGACGCTGATATTACCGCCGGCGAGGACATCACCGTTTCCGGCAACCCGCTTCTGGTCCAGGTATCGACGGACGGTAAAGTTTACAAGGCGAACAAGACAAGCGCTGCCCCGGTAATCGGTTTTGTATCAGAGACCGTTCTAACCGATGCTGATATCAGGGTGTCGAATCAGGGTATTGTAGAAGGATTCACGGGTCTAACAGCCGGTACAGAATACTTCATGGGAACTGACGGGGCTCTGGTCGAAGAGGGCGGGCTGGTAGCAGCCGACAACAAAGTGTCGGTCGGATTTGCCATGTCTGCAACCAGTATGTTTGTCATGATCCGGAAGGTAGACCCGATTCAAGCAAACAACGGAATTCCCATCGGAGGCGTCAACTTCTTCGCCACCAACACTGCACCGACCGGCTGGCTATCCTGTGACGGCTCAGCGGTAAGCCGCACCACATACAGCGCACTTTTCGCGGCAATCGGTACGACATTCGGCGCAGGCGACGGTAGTACCACATTCAACCTGCCTGACCCGCGTGAAGCGGCGCTGATTGCAACAGGTACGAATACTACGCACACCATAGCGTCGAATAACCCGCTTGCGCTTGGTGATTTCCAAGATGACCAGCTTGAAGACCATAAGCACATTAACTATGTACCGAGCAAAGATACAGGTGGTATGTATGGAAATGCAGGGACAAGCAATAATAATTACTGGCTCGACCCGGGTTTTGCGACAGGGCAGAACAACGCTCTACCTCTAACAAGTGACCCATATTCAGGAAGAACCGGCACCACGACCCACGGAAAACAGTTCGGCCTTCTTGCCTGTATAAAAGCCTTAGAAGTCACAGGTGCCGGAGATTTGGTGCTTGCGCCGGTGCCGGTTTATGATAGCGGGTGGGTGGCGAATAGTGATTGGACAACAATGGCTGTCCCTTTTGACTACTCAAGTATTTCTGGGCTCGCCGGTTTAACTATTGCCGAGCTTGACGTAGATTTATATATCAGTCCGAGCGGTGAAAACTCAAACGCCTTCGATTTCAAACTTGCCAATAATAGCGGAGCGTCAACAGGCCCTCGCGGTGTAACTTTCGGGCAGACCGGAACCGACGAAATAAGCCTTTTCACCGGCGACAATGGCATACTGTATATCTCAAGCATCGGCACAGCGGCGGCAATAGATAATGAAAGCTGGTACTATCGAATCATCATCAAGCCAAAAGTCCACACCGACCTCGCAATCCTGCAAAACAATGGCGGGTATAACTACGAAGAGCGCCACGACATATCGACCACCGGCGTACAGGTTGACCTGTCAAGCCTTTGGCTACAGCCTGATGGCTTTATCGCATCATACGCTTGGACAGGCGGAGACGGAACCGCGCAGATCACCTTTGACGGTGGGACGTACACCGGTAAGTTTATAGAAATTGTTGACACTGTGGACGTAATAGCCGCAGATACTTTTTTCGCAGGTATCGCATACTCAAGTTTCGGGAGGCTGACGCTCAGAAAGAAGAGCAACACAACGCTGATACTGCAGGAATACCCCACCGTAACAGTGCAAATGAGTGCGCAATCTTCGGGGGCTGCTGGTAAGGTTTTGTATGGAAACACGCAAAAAGACGACTATTCCATGTACTCATCCGGTGATATAACCGTTCCAATATCAGGAACTTATATTGTAAATGCCACTGTTTTCGGCAATGCCGCAACTATCGGAGTATATAATGGGACAGCGTTTCAATTCGGCGAGTACATATCAACTAACGGAACATATGGTAATTTCGCCATTACATTGACGCTCACCGCTGGAGATGTGATTTATGTGAATAGTGGAAACACTGTTTCCGCTGCGTCTGGTTCGTCTATGTCTGTAACGAGGGTTGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a166fbcbd0a8b6bef1ed7e94fdafa9770cc3df72218610bda9a205292b0dfda3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank