Protein

View in Explore
Genbank accession
AXF41547.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSKTLKIEVAIDDLDPNGVIASEFPTKDYVDSELSKRVSLGEDGKIVASQLPDYDQIAGLPEKFEDIEEDIVASKTQAVTDSQSYTDTKLSTELAKKADLVEGKIPHQQLPYPVNFEQNIANEFTEVRQEIDAGNQTLMQAIGTSENNTKIYVDSKVNEQREYIDNTFSEFEQQVNAQVNDFDNRLEASESAIVHYNKGETPLYVSTLAPYKKGSRILLDSGVEYVNNVDDNAANPNVNTTGWSSKIYHTSQIDYKWKSKSGGYALNDRVMLENGDIVKNTMPNNTTDPNVDMTGWVKVNSTKNIFDDLFGLSQSVINGNVITVDNFGAKGDGITDDSAAFQAYCDSPLTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPSLTNKSAFINCGPTIQNVTARCSNGAGKQVSFIEIDGYLANIDHITLVNFYNQIVVKQALVGFNFTNAWLYYSRNAGIYCEDPLNRVSTTGTFHNIYFQLGDGYSMIFDRDIHGCDFGNIIFESMNGGIKARTVAHCGFGKFWCENLKTETSKDWLEVTGTNSCYGNSFYAYTKLLGGWTSKTSPTLDSLPTNNYGGVSVSAEGIAIVNAGNKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADGSGAQYLASDTYTKLSRKWGTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWQIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTGTGATHGVQMIETYPGSWTSFTEAAGFKVFWRDAAGTLVDPHRFTVAFTATS
Physico‐chemical
properties
protein length:797 AA
molecular weight: 87084,83040 Da
isoelectric point:5,08211
aromaticity:0,10038
hydropathy:-0,36374

Domains

Domains [InterPro]
DC_0704
ATT
67–256
DC_0704 IPR012334
DC_0704
ATT
244–375
DC_0704 DC_0160
IPR011050
STR
316–656
IPR011050
IPR024535
ENZ
322–420
IPR024535
AXF41547.1
1 797
Architecture
ATT
STR
ATT 67-375 | STR 376-797
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41547.1
1 797
Domain Start End Length (AA) Confidence
N-terminal 1 338 338 0,9947
Central domain 339 621 284 0,9869
C-terminal 622 797 175 0,9783
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-338
Central
339-621
C-terminal
622-797

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15599
[NCBI] 		2202135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41547.1 [NCBI]
Genbank nucleotide accession
MH517022.1 [NCBI]
CDS location
range 137830 -> 140223
strand -
CDS
ATGTCAAAGACACTTAAAATCGAAGTAGCCATTGACGATCTTGACCCTAATGGGGTTATTGCGTCTGAATTCCCAACTAAAGATTATGTAGATAGTGAATTATCCAAGCGCGTCTCTTTAGGCGAAGATGGAAAAATTGTCGCTTCTCAATTACCAGATTACGATCAGATTGCTGGTTTACCGGAAAAATTTGAAGATATTGAGGAAGATATCGTTGCTAGTAAAACCCAAGCCGTAACGGACTCTCAATCCTATACAGACACCAAATTATCAACTGAGTTGGCTAAAAAAGCTGATCTTGTTGAAGGGAAAATCCCTCATCAACAATTACCATATCCAGTAAATTTTGAACAAAATATTGCAAATGAGTTTACCGAGGTGCGTCAAGAGATTGACGCTGGCAATCAAACTCTTATGCAAGCTATCGGTACATCAGAAAACAATACAAAAATTTACGTTGATAGCAAAGTAAATGAACAAAGAGAGTATATTGATAATACATTCTCCGAGTTTGAACAACAGGTCAATGCACAAGTAAATGATTTTGATAATCGTTTGGAAGCTTCTGAAAGCGCTATTGTTCATTATAATAAAGGCGAAACTCCGTTATATGTCTCAACTCTTGCGCCTTATAAAAAGGGTTCTAGAATATTGTTGGATAGCGGAGTGGAATACGTTAACAATGTTGATGATAATGCAGCTAATCCAAACGTTAATACTACTGGTTGGTCATCGAAAATTTATCATACGTCTCAGATTGATTATAAATGGAAATCGAAATCTGGTGGATACGCTCTAAATGACAGAGTAATGTTGGAAAATGGGGATATCGTTAAAAATACAATGCCAAACAATACCACAGACCCAAATGTGGATATGACGGGATGGGTTAAGGTTAACTCTACAAAGAATATTTTTGACGATCTTTTCGGATTGTCGCAATCAGTAATTAACGGAAATGTTATTACTGTTGATAATTTTGGAGCAAAGGGTGATGGTATTACTGATGATAGTGCCGCTTTTCAGGCCTACTGTGATAGTCCATTGACTGGACAAAATTTATATCTGGGTGCAAAAGGTCGATACATAATAAAAAACCAAGTAGACCTTAAAGGTAAGGGTTTGGTTGGTAACGGTTGTGGGAAAGTTTCCGAATTTTACTACAATCTTGGTTGTATTGATGTGGATGGTAGCTCTCCATCACTTACAAACAAGTCGGCATTCATTAACTGCGGACCTACAATCCAGAATGTAACAGCTCGATGTTCAAATGGCGCTGGCAAGCAAGTATCATTCATTGAAATAGATGGGTACTTAGCTAATATTGACCACATTACCCTTGTTAATTTTTATAATCAAATTGTTGTTAAGCAAGCACTTGTGGGATTCAATTTCACAAATGCTTGGCTATATTACTCGCGAAATGCTGGAATTTATTGTGAAGACCCATTGAACCGAGTTAGCACAACTGGAACATTCCACAATATTTATTTCCAGTTAGGTGATGGCTATTCGATGATTTTCGATAGAGATATTCATGGATGTGATTTTGGAAATATTATTTTTGAAAGCATGAATGGAGGTATCAAGGCTCGAACAGTAGCACATTGCGGTTTTGGTAAATTTTGGTGTGAAAACCTAAAGACAGAGACATCTAAAGATTGGCTGGAGGTTACTGGAACCAATAGCTGTTATGGAAATAGCTTTTATGCATACACGAAACTATTAGGCGGGTGGACATCAAAAACTTCGCCCACTTTGGACTCCTTACCAACAAATAACTATGGTGGTGTTTCAGTCAGTGCAGAAGGTATCGCTATTGTGAATGCTGGCAATAAGGCAAAAATGCTTATGCTGCCAAGTGGCTTTAAGACTGGCAATGCAACGATTGATGAAACGCACATTAGTTCATCTACCGTAACACCATTAGTTAAGAGACGTGTTATTGGCGCAGATGGCTCTGGAGCACAATACCTTGCATCAGACACCTATACAAAGCTTTCTCGCAAGTGGGGAACATATAACCACGGCTCAAATAATGCGGGTGCATTCTATGCACCAATGATGCTGACTTATGATCAGTCATTCAGCACACCTCAAAATAACAACGGATGGCAGATCGTAAAAGAGTCAACAGGAGTATACCGAGTTGAACGAGTTTCTGGAAATACATCAGTAATCACAAATGGGCATATTGTTGTTGGCTCACCCTTAATGGGTTCTCGTTTGGGGACTGGAACAGGTGCTACTCATGGAGTTCAAATGATTGAAACATATCCTGGATCATGGACTTCTTTCACCGAAGCAGCGGGATTTAAGGTATTTTGGCGCGATGCAGCGGGGACGCTGGTTGACCCGCATAGGTTTACAGTCGCCTTTACTGCTACAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82d38fba3769398d4a37bd998141091ccc281902bd7f532178e9ee19ccaee9de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of SH-Ab 15599, a novel bacteriophage targeting carbapenem-resistant Acinetobacter baumannii Ji,J., Wang,R., Luo,T., Xu,M., Guo,X., Hu,F., Li,M. and He,P. 2011-05-01 — GenBank