Protein

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Genbank accession
CAM0020017.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTKLNNRMIDGAAVNVRDFGAVGDGVTDDTAAWQLAVGSGTVVLGNPGDVYLISSQIDITSETHIDLRHSELSSLWVDNASGRHSTLLFNVVGVRGFTLENGKLEGNRARTGFQEAVSEEFTSPLVRLDTSERVVIRNILIDGYGSDVVSGGWDVTSQYGWAVIKAYLTNDLTYDNVEITDSISEGIYNTQCDNLTAVNLDIHDNSSSFITPFHAWYCENVVITDSKITLSDTELSGSTLNVYSRHVRISNNYIRGGNSLDIGNEAGDMWTAFNVLIENNVLYECKIKGDLGENTKINDLKISNNNIRAGSRGQGIYLGGLINRSEISSNTIQTAGATDCIAVRLSAATDNSGLQPHVTSDVCNIYGNTLIGEGASAYSTGINFSRQVRASNVNIYDNIVKYCACPVYLGSLAKKATYTDFRIYNNTLIVPPGTPYSSGSGSGMCVFLVGDSSDTLLESILVDGLDISNNYMETESTCVYISLSGIPVGKSITRLNNFYITDNTFHLTADGDVNKSGVVVSGSGETNGFINDVRILRNNIDTQSLGENGVYASRVDNLMISNNLIGSHTYGITLATEIGGDYVRIEDNTILNPPVSFRHTSSFTDNTTLKFINRNPGATRGATLNFTDRGPVVDRPHQASTLTYLYDGLEYFDETRERPVYYRASSSTSWVYSDGSEA
Physico‐chemical
properties
protein length:679 AA
molecular weight: 73720,64520 Da
isoelectric point:4,69191
aromaticity:0,08395
hydropathy:-0,20177

Domains

Domains [InterPro]
IPR011050
STR
13–342
IPR011050 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_2124
IPR012334
STR
14–412
IPR012334 IPR011050
IPR024535
ENZ
15–66
IPR024535 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR011050
IPR012334
STR
420–630
IPR012334
CAM0020017.1
1 679
Architecture
STR
STR
RBD
STR 13-412 | STR 418-630 | RBD 631-679
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0020017.1
1 679
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,9545
Central domain 32 626 596 0,9899
C-terminal 627 679 52 0,9516
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-626
C-terminal
627-679

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D181
[NCBI] 		3104936 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0020017.1 [NCBI]
Genbank nucleotide accession
OZ196140.1 [NCBI]
CDS location
range 44367 -> 46406
strand +
CDS
ATGACTACTAAATTAAACAATCGAATGATCGACGGGGCTGCCGTCAACGTTCGCGATTTCGGTGCGGTTGGCGACGGGGTAACCGATGATACTGCAGCATGGCAACTTGCAGTAGGCTCGGGGACTGTGGTATTAGGTAACCCAGGAGATGTGTATCTTATATCTAGCCAAATCGATATTACAAGCGAAACTCATATAGACTTACGTCACTCTGAACTGTCTTCACTATGGGTCGATAATGCTAGCGGAAGACACTCAACTCTACTATTTAATGTAGTAGGGGTGAGGGGGTTTACTCTAGAGAATGGTAAACTGGAAGGTAATAGGGCTAGAACAGGATTCCAAGAAGCTGTTAGTGAGGAGTTTACATCTCCCTTAGTAAGATTAGATACCTCGGAAAGAGTAGTGATCCGCAATATATTAATCGATGGGTATGGCTCAGATGTAGTATCTGGGGGGTGGGACGTTACGTCTCAATATGGATGGGCTGTAATAAAGGCATATTTGACTAACGATCTTACATACGATAACGTAGAAATTACCGATAGTATATCTGAAGGCATATACAATACTCAGTGCGATAATCTAACGGCCGTAAACCTAGACATACATGATAATAGCTCCTCGTTCATCACACCTTTCCATGCGTGGTATTGTGAAAACGTAGTGATCACTGACAGTAAGATAACGCTATCAGATACTGAACTATCTGGATCTACTCTCAATGTATACTCTCGTCACGTCCGTATATCTAATAACTATATCCGAGGAGGTAATTCCTTAGACATAGGTAATGAAGCAGGAGATATGTGGACAGCTTTTAACGTTCTTATTGAGAATAACGTTTTGTATGAATGTAAGATCAAAGGCGATCTAGGGGAGAATACTAAGATAAATGATTTGAAGATCTCTAATAATAACATTAGAGCAGGTAGTCGTGGTCAAGGTATTTACTTAGGTGGTTTGATTAACCGCTCAGAGATATCGAGTAATACTATTCAAACTGCAGGAGCTACTGACTGTATAGCCGTCAGGTTAAGTGCAGCGACAGATAACAGTGGACTTCAGCCTCATGTAACTTCCGATGTATGTAATATATATGGAAATACCTTGATAGGCGAAGGTGCATCTGCGTATTCTACTGGAATTAACTTCTCCAGGCAGGTTAGAGCGTCTAACGTAAATATATACGATAACATAGTAAAATATTGCGCATGTCCTGTCTACTTAGGTTCATTAGCTAAAAAGGCGACTTATACAGATTTTCGTATATATAACAACACGTTAATCGTACCTCCAGGCACTCCGTATAGCTCTGGATCTGGGTCAGGTATGTGCGTATTCCTAGTAGGAGACTCCTCGGATACCTTACTAGAGAGTATACTAGTAGATGGCCTCGATATCTCCAATAACTACATGGAGACAGAGTCTACGTGCGTATACATCTCTTTAAGTGGCATACCGGTAGGTAAATCTATTACTAGATTGAATAATTTCTATATTACAGATAATACCTTCCACCTGACCGCAGACGGGGATGTTAACAAATCCGGAGTAGTAGTATCTGGATCTGGAGAAACTAATGGTTTCATAAATGATGTCCGAATCTTACGTAACAATATAGATACTCAATCATTAGGTGAAAACGGGGTGTATGCTAGTCGCGTAGATAATTTGATGATAAGCAATAACCTAATAGGATCGCATACTTATGGTATTACTTTGGCTACCGAGATAGGAGGAGATTACGTGAGAATAGAGGATAATACTATCCTCAATCCTCCTGTATCGTTCAGACATACATCTTCGTTTACAGATAACACTACCTTGAAGTTTATCAATCGTAACCCTGGAGCTACTAGAGGTGCAACCTTGAACTTCACAGATAGAGGTCCAGTAGTAGATAGACCTCATCAGGCATCTACATTAACATATCTATATGATGGATTAGAGTACTTTGACGAGACTAGGGAGAGGCCTGTTTATTATAGAGCGTCTAGCTCAACTAGTTGGGTATATTCAGATGGATCAGAGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62bc8628c3ff99ef6d59ba7b0a3a846f9b417a1e7f19abf60587630b73e7e3fb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8227
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50