Protein

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UniProt accession
A0A8S5T4J9 [UniProt]
Protein name
PKD domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQVVPQWYIDAMKADSRNINCKIAISEDHKATTPSLQLDKEDIFDLECIQELQDAGVPCAYLGQNILTIKVYNKDGMFTKNKSSYEKYFKKGNYVRCDCTVPIPGQSMDFGPRLFTGYFDSLEVAEDAQSATITCYDSLHYIKSKKSPWFRPTGYYAEQRMSLKDMIDYYMKLCGFQPTALEHGVHEDVVYMIDDGLTYEPDFLYTEGKTIGDVLTSFAKIGLCAVYCNAYGVLCFKLLPKTRNEVYKFDDETQVYSSRASSLGYEEYTEVSVAVHDAIGTSKAYNIVHEAYRSEQKAMTVGTIDENSIELSSSRMPVAVRLLTDERQAEIADKNVGFCQLIRSYDYGSNVMSLRIDSKKALAADMCIYSYEIWEQTTSQEVNVSPDYAENSFFLTEKTLEIDEALITDTDYAKSISETFAKMLPAISQSLTAEVRGEPAIELLDLVSVYNEVAAQVNVQVLPTRLQYTYNGSLTCNIDAIYYSAVAMIVYAFLAPGMYIPFDMRAIYIAAKCSPEDAGIVNGAGAYALGDVITLTCEPFEGYKVAYWVDARGNRVSNSATAVITVERYEQYTAILSELEVSTSLTLDVPADALRVEIPVMSLQEVNGTVDWGDGTTEEYEANYPYEHTYTTEGTYRITLQAPIVNMPDEIFRNNAMINSFIAGSKIAYLPAGMFTNSALKNINLLHAKNIVAVGEMQSNSWASTTGTGVWLGLPNQACDHSFNTVYSTDTNRYSAGLGMVAPWTKNNVSVHSHYDGYPITYASTYNLSAFNGVYRLKDLSINAPLNTVRITSDFDNMQVGNRANFMLSNISLNTYLQCVDIDWAESLTDISTPDNAYGTTVKLHSYVNNLAAIRLGDQSTVLFNSAITHDLSIYFNANTAHVVVPSGIPNPTLIHVKPNTVITIRPNDVSNVFGIIRDL
Physico‐chemical
properties
protein length:920 AA
molecular weight: 102392,27280 Da
isoelectric point:4,71300
aromaticity:0,10652
hydropathy:-0,13587

Domains

Domains [InterPro]
DC_1070
STR
44–423
DC_1070 IPR044060 IPR013783
IPR035986
STR
607–642
IPR035986
IPR000601
ENZ
611–642
IPR000601
A0A8S5T4J9
1 920
Architecture
STR
RBD
STR
STR 44-423 | RBD 513-567 | STR 596-646 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5T4J9
1 920
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,6591
Central domain 140 383 245 0,5039
C-terminal 384 920 536 0,1064
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-383
C-terminal
384-920

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctn8e14
[NCBI] 		2827936 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF58161.1 [NCBI]
Genbank nucleotide accession
BK032747 [NCBI]
CDS location
range 3368 -> 6130
strand -
CDS
ATGCAAGTAGTACCTCAATGGTATATTGATGCAATGAAAGCAGACAGTAGAAATATTAATTGCAAAATAGCAATATCAGAAGACCATAAAGCAACTACTCCTTCATTACAGTTAGATAAAGAAGATATATTCGATTTAGAGTGCATACAGGAGCTCCAGGATGCTGGGGTTCCGTGTGCTTATTTAGGGCAGAATATACTTACAATAAAAGTCTACAACAAAGACGGAATGTTTACAAAGAATAAGAGTAGCTATGAAAAATACTTCAAGAAGGGTAACTATGTACGATGTGATTGTACAGTGCCAATACCAGGGCAGTCAATGGACTTTGGTCCTAGACTCTTTACTGGCTACTTTGATAGTCTAGAAGTAGCTGAAGATGCACAGTCAGCAACTATTACATGCTACGACTCGTTACATTATATAAAGAGTAAGAAGTCGCCATGGTTTAGGCCTACTGGCTACTATGCGGAGCAAAGAATGTCACTAAAAGATATGATAGATTATTATATGAAATTATGCGGCTTTCAGCCTACAGCTCTTGAGCATGGTGTACATGAAGACGTAGTATATATGATTGATGATGGCTTAACATATGAGCCAGATTTTCTATATACAGAAGGAAAAACAATAGGTGACGTGCTAACTAGTTTTGCAAAGATAGGCTTATGTGCTGTTTACTGTAACGCCTATGGCGTACTTTGCTTTAAATTACTGCCTAAAACAAGAAACGAAGTATACAAGTTTGATGATGAAACACAAGTATACTCCAGTCGTGCATCTTCCCTAGGCTATGAAGAATACACAGAAGTGTCAGTGGCTGTACATGATGCTATTGGTACATCTAAAGCATATAATATAGTTCATGAAGCATATAGGTCAGAGCAAAAAGCAATGACAGTAGGTACCATTGATGAAAATAGCATAGAGCTCTCTAGCAGTAGAATGCCTGTTGCTGTTAGGCTCTTGACAGATGAAAGGCAAGCAGAAATAGCTGATAAAAATGTTGGCTTCTGCCAACTAATACGCTCATATGATTATGGCTCTAATGTTATGAGTCTGCGTATTGATAGTAAAAAAGCCCTTGCTGCTGATATGTGTATCTACAGCTATGAAATTTGGGAGCAGACTACGTCACAAGAAGTTAATGTATCTCCTGACTATGCTGAAAATTCTTTCTTCTTAACTGAGAAGACGCTTGAAATTGACGAAGCACTTATTACTGATACAGACTACGCAAAAAGTATCTCAGAAACCTTTGCAAAGATGCTCCCTGCAATTAGTCAGTCATTAACTGCCGAGGTTCGCGGTGAGCCTGCGATAGAGCTGCTAGACTTAGTCTCTGTGTATAATGAAGTTGCCGCACAAGTGAATGTCCAAGTTCTTCCTACTCGTTTACAGTATACTTATAACGGTAGTTTAACATGTAATATAGATGCTATTTACTACTCAGCTGTCGCAATGATTGTATATGCTTTTCTTGCCCCTGGTATGTATATCCCGTTCGATATGCGTGCTATCTACATAGCTGCTAAGTGCTCCCCTGAAGATGCTGGTATTGTCAATGGGGCAGGAGCATATGCACTTGGCGACGTTATTACGCTAACATGTGAACCATTCGAAGGATATAAGGTAGCATACTGGGTAGACGCGCGTGGTAACAGGGTGAGTAATAGCGCAACAGCTGTTATTACAGTAGAGCGCTATGAGCAGTATACTGCAATTTTATCAGAACTTGAAGTGTCTACATCTTTAACCTTGGATGTGCCAGCGGATGCATTACGTGTAGAAATACCTGTAATGAGCTTACAGGAAGTTAATGGTACCGTTGACTGGGGTGATGGTACTACAGAAGAATATGAGGCTAATTATCCATATGAGCATACTTACACTACTGAAGGCACCTATAGGATAACTTTACAGGCTCCAATAGTGAACATGCCAGATGAAATATTTAGGAATAATGCAATGATTAATAGCTTTATAGCAGGTTCAAAGATAGCATATTTGCCCGCAGGTATGTTCACAAATTCTGCCCTTAAAAATATTAACTTACTTCATGCAAAGAATATTGTTGCTGTTGGTGAAATGCAAAGCAATTCATGGGCTAGCACTACAGGTACTGGTGTATGGCTTGGGCTACCAAATCAAGCCTGTGACCATTCATTTAATACAGTCTACTCTACAGACACAAATAGATACTCTGCCGGATTAGGTATGGTGGCACCATGGACTAAGAATAATGTGTCTGTACATAGTCACTATGATGGCTACCCGATTACGTATGCTTCCACTTACAATCTGTCTGCATTTAACGGTGTATATAGGCTTAAAGACCTATCTATCAATGCACCACTAAATACAGTACGTATTACATCAGACTTTGATAATATGCAAGTTGGAAATCGTGCAAACTTTATGCTGTCCAATATATCACTAAATACATACCTGCAATGTGTAGATATTGACTGGGCTGAAAGCCTCACAGATATTAGTACGCCGGATAATGCATATGGAACCACAGTTAAACTACACAGTTATGTAAATAATCTTGCAGCAATACGCCTTGGAGACCAATCTACTGTACTATTCAATTCAGCCATAACGCATGATTTAAGTATTTACTTTAACGCGAATACTGCACACGTTGTTGTACCGTCTGGTATTCCTAATCCTACCCTGATACATGTAAAGCCAAATACAGTTATTACTATACGCCCAAATGACGTTTCAAATGTATTTGGTATTATCCGTGATTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2ccc9e272ecb273f05bfb7851e362dd121420e4a3f7bf095c75db93b3ee8840b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50