Protein

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UniProt accession
A0A1D8KQW2 [UniProt]
Protein name
Sericin 1-like protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MSQLNVDALKHSGGTGSGIDLQSSGNFAFDTNTLYVDSVNDRIGINDSTPTRTLDVSGSEGINFGTAPLFEGVNIVGGTSNGNTNIDLLSGSVHLFTSNNTGNWTPNFRGDASTTLDSIMDTGQVIVATIISSNGGSSGYAANMNIDGNGQTEYWANDSEPDDRGGTSGYDVYQYSIIKTGSGNSYLVLANRTFMD
Physico‐chemical
properties
protein length:196 AA
molecular weight: 20508,80340 Da
isoelectric point:4,05793
aromaticity:0,08163
hydropathy:-0,35102

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1D8KQW2
1 196
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2793
Central domain 11 185 176 0,0266
C-terminal 186 196 10 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-185
C-terminal
186-196

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM22
[NCBI] 		1883365 Uroviricota > Caudoviricetes > Pantevenvirales > Alisovirus > Alisovirus socal22
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV61081.1 [NCBI]
Genbank nucleotide accession
KU686208 [NCBI]
CDS location
range 29274 -> 29864
strand +
CDS
ATGTCTCAACTAAATGTAGATGCGTTAAAACACTCTGGTGGAACTGGGTCAGGTATTGATCTGCAAAGTAGTGGTAATTTCGCATTTGACACTAATACATTATATGTCGATTCTGTTAATGATCGAATTGGTATTAACGATTCAACACCCACTCGTACTTTAGATGTTAGTGGTAGTGAAGGAATTAACTTTGGAACTGCTCCATTATTTGAAGGTGTGAATATTGTTGGTGGTACTTCTAATGGTAACACTAACATTGACCTGTTGTCGGGATCTGTTCACTTATTCACTTCAAACAACACTGGTAACTGGACTCCCAATTTTAGAGGTGATGCCTCTACTACTTTAGACAGTATCATGGATACTGGTCAGGTTATTGTTGCTACTATTATTTCCTCAAATGGTGGAAGTTCTGGTTATGCAGCAAATATGAATATTGACGGTAACGGTCAAACCGAATACTGGGCAAATGATTCTGAACCTGATGATAGAGGTGGTACGAGTGGGTATGATGTATACCAATATAGTATTATTAAAACAGGTTCTGGTAACAGTTACTTGGTTTTAGCAAATAGAACGTTTATGGATTGA
Genbank protein accession
AOV61295.1 [NCBI]
Genbank nucleotide accession
KU686209 [NCBI]
CDS location
range 29244 -> 29834
strand +
CDS
ATGTCTCAACTAAATGTAGATGCGTTAAAACACTCTGGTGGAACTGGGTCAGGTATTGATCTGCAAAGTAGTGGTAATTTCGCATTTGACACTAATACATTATATGTCGATTCTGTTAATGATCGAATTGGTATTAACGATTCAACACCCACTCGTACTTTAGATGTTAGTGGTAGTGAAGGAATTAACTTTGGAACTGCTCCATTATTTGAAGGTGTGAATATTGTTGGTGGTACTTCTAATGGTAACACTAACATTGACCTGTTGTCGGGATCTGTTCACTTATTCACTTCAAACAACACTGGTAACTGGACTCCCAATTTTAGAGGTGATGCCTCTACTACTTTAGACAGTATCATGGATACTGGTCAGGTTATTGTTGCTACTATTATTTCCTCAAATGGTGGAAGTTCTGGTTATGCAGCAAATATGAATATTGACGGTAACGGTCAAACCGAATACTGGGCAAATGATTCTGAACCTGATGATAGAGGTGGTACGAGTGGGTATGATGTATACCAATATAGTATTATTAAAACAGGTTCTGGTAACAGTTACTTGGTTTTAGCAAATAGAACGTTTATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc1f2298dba49121cd6c9a3938577c130cb135f8f193302dfc94177a9d7e1ff6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7422
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50