Protein

View in Explore

Genbank accession

AGS80618.1 [GenBank]

Protein name

leucine rich repeat protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

DLNDQKLTTLPNEIGQLQNLQELDLSNNQLITLPKEIGKLKNLQNLNLSINQFTTFPNEIGKLKNLQELSLGNNQLKTLPNEIGQLQKLQQLDLRRNQFTTLPNEIGQLQNLQSLDLSYNQLTTLPNEIGQLQKLQQLDLNYNQLTTLPNEIGQLQKLQQLDLNYNQLKILPNEIGQIENLQELDLSDNQLETLSNEIGKLKNLQELGLDNNQLKILPNEIGQLKNLESLYLRNNQLKTLSNEIGQLKNLESLYLRNNQLKTLSNEIGQLKNLQELDLHNNQLTTLPNEIGQLQSLQRLDLGNNQLKTLSNEIGKLKNLQELGLWNNQLKTLPNEIGKLKNLESLDLSDNQLKTLSNEIGKLKNLESLDLSDNQLKTLPNEIGKLQSLQELYLSDNQLKTLPKEIGKYKVYKSCI

Physico‐chemical properties

protein length:	415 AA
molecular weight:	47384,29950 Da
isoelectric point:	5,09768
aromaticity:	0,02892
hydropathy:	-0,66964

Domains

Domains [InterPro]

IPR032675
STR
1–75

IPR032675 IPR032675 IPR032675 IPR032675

IPR055414
STR
2–72

IPR055414 SM00364 IPR055414 SM00365 IPR003591 SM00365 IPR003591 IPR003591 PR00019 IPR003591 SM00364

G3DSA:3.80.10.10:FF:000041
Unmapped
11–103

G3DSA:3.80.10.10:FF:000041 G3DSA:3.80.10.10:FF:000041 SM00364 IPR003591 SM00365 SM00364 SM00364 IPR055414

IPR003591
Unmapped
17–39

IPR003591 IPR003591 IPR003591 IPR003591 SM00365 SM00364 IPR003591 SM00364 IPR003591 SM00364 SM00364 IPR003591 SM00365 SM00364 SM00364 IPR003591

SM00365
Unmapped
17–48

SM00365 SM00364 IPR001611 IPR003591 SM00365 SM00365 IPR003591 IPR001611 IPR001611 IPR001611 IPR001611 IPR001611 SM00364 IPR003591 SM00365 SM00365

SM00364
Unmapped
17–36

SM00364 SM00364 SM00365 SM00364 IPR003591 SM00364 SM00365 IPR001611 IPR001611 SM00365 IPR001611 IPR001611

IPR001611
STR
19–40

IPR001611 IPR001611 IPR001611 IPR001611 IPR001611 IPR001611 IPR001611 Coil IPR001611

SSF52047
STR
22–380

SSF52047

IPR050715
Unmapped
46–195

IPR050715 G3DSA:3.80.10.10:FF:000307

PR00019
Unmapped
112–125

PR00019 Coil Coil

AGS80618.1

1 415

Architecture

STR

STR 1-410 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032675	STR	IPR032675	1	75	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
IPR055414	STR	DC_0782	2	72	InterPro cluster	Disease resistance R13L4/SHOC-2-like, LRR domain	Central	High	Text match	3 proteins / 5 hits
G3DSA:3.80.10.10:FF:000041	Unmapped	-	11	103	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	-	-	-	-
IPR003591	Unmapped	-	17	39	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	17	48	SMART	LRR_sd22_2	-	-	-	-
SM00364	Unmapped	-	17	36	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	19	40	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
SSF52047	STR	SSF52047	22	380	Merged direct domain	SSF52047	Central	Low	Positional only	2 proteins / 2 hits
IPR003591	Unmapped	-	40	62	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	40	59	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	42	63	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR050715	Unmapped	-	46	195	InterPro	Leucine-rich repeat and signaling effector domain-containing protein	-	-	-	-
IPR003591	Unmapped	-	63	85	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	63	82	SMART	LRR_bac_2	-	-	-	-
SM00365	Unmapped	-	63	94	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	65	86	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR032675	STR	IPR032675	76	167	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
SM00364	Unmapped	-	86	105	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	86	108	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
IPR001611	STR	DC_0281	88	109	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
G3DSA:3.80.10.10:FF:000041	Unmapped	-	104	195	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	-	-	-	-
IPR055414	STR	DC_0782	106	209	InterPro cluster	Disease resistance R13L4/SHOC-2-like, LRR domain	Central	High	Text match	3 proteins / 5 hits
SM00365	Unmapped	-	109	130	SMART	LRR_sd22_2	-	-	-	-
IPR003591	Unmapped	-	109	131	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	109	128	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	111	132	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
PR00019	Unmapped	-	112	125	PRINTS	Leucine-rich repeat signature	-	-	-	-
SM00364	Unmapped	-	132	151	SMART	LRR_bac_2	-	-	-	-
SM00365	Unmapped	-	132	153	SMART	LRR_sd22_2	-	-	-	-
IPR003591	Unmapped	-	132	154	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
IPR001611	STR	DC_0281	134	155	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR003591	Unmapped	-	155	177	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	155	176	SMART	LRR_sd22_2	-	-	-	-
SM00364	Unmapped	-	155	174	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	157	178	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR032675	STR	IPR032675	168	257	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
SM00364	Unmapped	-	178	197	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	178	200	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	178	206	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	180	201	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
Coil	Unmapped	-	184	204	Coils	Coil	-	-	-	-
SM00364	Unmapped	-	201	220	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	201	223	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
IPR001611	STR	DC_0281	203	224	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
SM00365	Unmapped	-	224	245	SMART	LRR_sd22_2	-	-	-	-
IPR003591	Unmapped	-	224	246	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	224	243	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	226	247	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR003591	Unmapped	-	247	269	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	247	268	SMART	LRR_sd22_2	-	-	-	-
SM00364	Unmapped	-	247	266	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	249	270	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR001611	STR	DC_0281	249	306	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR032675	STR	IPR032675	258	410	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
SM00365	Unmapped	-	270	291	SMART	LRR_sd22_2	-	-	-	-
SM00364	Unmapped	-	270	289	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	270	292	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
IPR001611	STR	DC_0281	272	293	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
IPR003591	Unmapped	-	293	315	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	293	312	SMART	LRR_bac_2	-	-	-	-
SM00365	Unmapped	-	293	321	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	295	316	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
Coil	Unmapped	-	299	319	Coils	Coil	-	-	-	-
G3DSA:3.80.10.10:FF:000307	Unmapped	-	303	409	FunFam	Leucine-rich repeats and death domain-containing 1	-	-	-	-
IPR055414	STR	DC_0782	312	404	InterPro cluster	Disease resistance R13L4/SHOC-2-like, LRR domain	Central	High	Text match	3 proteins / 5 hits
IPR003591	Unmapped	-	316	338	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	316	335	SMART	LRR_bac_2	-	-	-	-
IPR001611	STR	DC_0281	318	339	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
PR00019	Unmapped	-	339	352	PRINTS	Leucine-rich repeat signature	-	-	-	-
SM00364	Unmapped	-	339	358	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	339	361	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	339	360	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	341	362	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
Coil	Unmapped	-	345	365	Coils	Coil	-	-	-	-
IPR003591	Unmapped	-	362	384	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00364	Unmapped	-	362	381	SMART	LRR_bac_2	-	-	-	-
SM00365	Unmapped	-	362	383	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	364	385	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits
SM00364	Unmapped	-	385	404	SMART	LRR_bac_2	-	-	-	-
IPR003591	Unmapped	-	385	408	InterPro	Leucine-rich repeat, typical subtype	-	-	-	-
SM00365	Unmapped	-	385	407	SMART	LRR_sd22_2	-	-	-	-
IPR001611	STR	DC_0281	387	408	InterPro cluster	Leucine-rich repeat	Central	High	Text match	16 proteins / 69 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AGS80618.1

1 415

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	403	403	0,9941
Central domain	404	404	2	0,0326
C-terminal	405	415	10	0,9922

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-403

Central
404-404

C-terminal
405-415

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Leptospira phage vB_LnoZ_CZ214-LE1 [NCBI]	1334243	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

AGS80618.1 [NCBI]

Genbank nucleotide accession

KF114877 [NCBI]

CDS location

range 1 -> 1248
strand +

CDS

GATTTGAATGATCAAAAACTCACGACCCTTCCTAATGAAATTGGACAATTACAAAACTTACAAGAGTTGGATTTGAGTAATAACCAGCTCATAACTCTTCCTAAAGAAATTGGAAAACTAAAAAATTTACAAAATTTGAATTTGAGTATTAACCAGTTCACGACTTTTCCTAACGAAATTGGAAAATTAAAGAACTTACAAGAGTTGAGTTTGGGGAATAACCAACTTAAGACTCTTCCCAACGAAATCGGACAACTACAGAAGTTACAACAGTTGGATTTACGTCGTAACCAATTCACGACTCTTCCCAACGAAATCGGACAACTACAGAACTTGCAAAGTTTAGATTTGAGTTATAACCAGCTCACAACTCTTCCCAACGAAATCGGACAACTACAGAAGTTACAACAGTTGGATTTGAATTATAACCAGCTCACAACTCTTCCCAACGAAATCGGACAACTACAGAAGTTACAACAATTGGATTTGAATTATAATCAACTCAAGATTCTTCCTAACGAAATTGGACAAATTGAGAATTTGCAAGAGTTGGATTTGAGTGATAACCAACTCGAGACTCTTTCTAACGAAATTGGAAAATTAAAGAACTTACAAGAGTTGGGTTTGGATAATAACCAACTTAAGATTCTTCCTAACGAAATTGGACAACTAAAGAACTTGGAAAGTTTGTATTTGAGGAATAACCAACTCAAGACTCTTTCTAACGAAATTGGACAACTAAAGAACTTGGAAAGTTTGTATTTGAGGAATAACCAACTCAAGACTCTTTCTAACGAAATCGGACAATTAAAGAACTTACAAGAGTTGGATTTACATAATAACCAACTCACAACTCTTCCTAACGAAATTGGACAACTACAAAGTTTACAACGGTTGGATTTGGGTAATAATCAACTTAAGACTCTTTCTAACGAAATTGGAAAATTAAAGAACTTACAAGAGTTGGGTTTGTGGAATAACCAACTTAAGACTCTTCCTAACGAAATTGGAAAATTAAAAAACTTGGAAAGTTTAGATTTGAGTGATAACCAACTTAAGACTCTTTCTAACGAAATTGGAAAATTAAAAAACTTGGAAAGTTTAGATTTGAGTGATAACCAACTCAAGACTCTTCCTAACGAAATTGGAAAACTACAAAGTTTACAAGAGTTGTATTTGAGTGATAACCAACTCAAGACTCTTCCCAAAGAAATCGGAAAATACAAAGTTTACAAGAGTTGTATTTGA

Genome Context

Tertiary structure

PDB ID

5b1e763d2059e44ee80afc7a84fd97f5456c9eade86ed14abe7185ebaac2aaf0

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,9772

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence