Protein

View in Explore
Genbank accession
XGT88939.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MKVQGSYQSVVLGVSQQVPHERRSGQMWEQVNMVSDPVRGVARRWGSVFLDNREVLASEMTEANMKKAVNLYREAEYTCDGRDLIVLYAKGDTRPYGLPPVMAYDITQKNILNVVGEGSLFDALKANGVSSRANVGRFLYLAVNNFVTTFSVEDNIGAPLAARGGAVWVRQGNFSRPYAMTVVNTDGSTRTFTYTTPAASYPGKLDTSDIPIPDVPTNPGTGDWTPSNTELQQYQKELAEYNKLISDRTNAYNSAVTSWIGEATEKMQPAYIANQLAQQLLDAGYTNVWPNGAYVTWNHSAGIADVVMPENSDGTFMRAVAYQVDEATSLSPKHWVGQVVKVSAKKQDQKDAYYMQAFRKSSDTAAFTDVIWRETAGQRTKPGDIFLHCWADLNTLYIGSSPAGLNSLAPAAEAPGYENSSVGDALSSPAPGFFGKAINYLGVFQDRLLISSGAVVFASRPGDYLNWFRKTVLEVIDNDPMEMYALGSEDDTISWDTTFDRNLVLFGRKNQYIIPGRQTMSPKSPYIQIMSSIKDTVLAEPKASGSYVFYGKDTSVKGSVHQIQIGAVSDSSDSYEISQALDNYLKGRPVQLVTIQSPNNVVVRTTDYNYGLYIYTYLQNMNGGERVFDSWSRWEWPKALGMCVGMCDDDGVLLVFKLRNLDGKTLLQAESFSFETELPDNGYLDCNRPMDLDVPREHGRAAHYVGGHEYFLLGSRLDKIDSNMSWWADDIEHLRTGFVTEAYVVPTSPYMRDRNDNPITTGRLTLGSFKVNVEQTAGLYGSVTTADRTYDMVDYGGRLLTRKSNQVGRVPLVDTSLSVPVYREIREFQLKLQARDWLPLTITGLEWVGQWFNRTQRV
Physico‐chemical
properties
protein length:858 AA
molecular weight: 95631,24530 Da
isoelectric point:5,30844
aromaticity:0,10723
hydropathy:-0,35618

Domains

Domains [InterPro]
DC_0058
STR
1–858
DC_0058
IPR058003
TTP
3–658
IPR058003 IPR058003
Coil
Unmapped
231–251
Coil
XGT88939.1
1 858
Architecture
STR
STR 1-858
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGT88939.1
1 858
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,8797
Central domain 157 355 200 0,5221
C-terminal 356 858 502 0,1963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-355
C-terminal
356-858

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_GP-4
[NCBI] 		3146126 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGT88939.1 [NCBI]
Genbank nucleotide accession
PP454754.1 [NCBI]
CDS location
range 25768 -> 28344
strand +
CDS
ATGAAGGTTCAAGGCAGCTATCAATCAGTGGTGCTCGGCGTAAGCCAGCAGGTGCCGCATGAGCGCCGTAGCGGTCAGATGTGGGAGCAGGTCAACATGGTGAGTGATCCCGTTCGCGGGGTGGCTCGCCGTTGGGGCTCTGTGTTCCTGGATAACCGCGAAGTCCTTGCCTCAGAAATGACTGAGGCGAATATGAAGAAAGCAGTAAACCTGTACCGGGAAGCCGAGTACACATGCGACGGCCGCGACTTAATAGTGCTGTATGCAAAGGGAGACACACGACCGTACGGATTGCCACCAGTAATGGCCTACGATATCACGCAGAAGAATATTCTCAATGTGGTCGGGGAAGGTAGTCTGTTCGACGCACTTAAAGCGAATGGTGTGTCATCCCGCGCCAACGTTGGGCGCTTCCTGTACCTGGCCGTTAATAACTTCGTCACCACCTTCTCGGTCGAGGATAACATTGGTGCGCCGCTGGCGGCACGTGGTGGTGCGGTGTGGGTACGCCAGGGTAACTTCTCCCGACCGTACGCAATGACCGTGGTTAATACCGACGGTAGCACACGCACATTCACGTACACCACCCCAGCCGCATCATACCCCGGTAAGCTGGACACCTCGGACATTCCAATCCCGGACGTACCTACTAACCCAGGTACCGGGGACTGGACACCAAGCAACACTGAGTTGCAGCAATATCAGAAGGAATTGGCTGAATATAACAAGCTCATCAGTGACCGTACAAACGCCTACAACTCAGCCGTTACAAGCTGGATTGGTGAGGCGACGGAGAAGATGCAGCCCGCGTATATCGCCAACCAGCTTGCACAACAGCTGCTGGATGCCGGGTACACTAACGTGTGGCCTAATGGCGCATATGTGACGTGGAACCACAGCGCTGGTATTGCTGACGTTGTAATGCCGGAGAATAGTGACGGTACGTTCATGCGTGCTGTGGCCTACCAGGTTGACGAAGCAACCAGCCTCTCTCCGAAGCATTGGGTAGGACAGGTGGTTAAGGTATCGGCTAAGAAGCAGGACCAAAAGGACGCCTACTATATGCAGGCATTCCGCAAGTCCAGCGACACTGCGGCATTCACGGATGTTATCTGGCGGGAGACCGCTGGGCAGCGTACCAAGCCTGGGGATATCTTCCTGCACTGCTGGGCTGACCTGAACACCCTGTACATCGGAAGCAGCCCTGCTGGCCTCAATAGCCTGGCACCTGCCGCCGAGGCACCTGGGTACGAGAACAGCTCAGTAGGGGACGCACTGTCATCCCCGGCACCTGGCTTCTTTGGCAAGGCGATTAACTACCTGGGCGTGTTCCAGGACCGACTGCTGATTAGCTCTGGCGCTGTGGTGTTCGCCAGCCGACCCGGTGATTACCTGAACTGGTTCCGCAAGACTGTGCTGGAGGTGATTGACAACGACCCTATGGAGATGTATGCCCTCGGCTCTGAGGACGATACGATTTCCTGGGACACAACGTTCGACCGCAACCTGGTACTGTTCGGCCGCAAGAACCAGTATATCATACCCGGTCGGCAGACGATGAGCCCGAAGTCCCCATACATCCAGATTATGTCAAGCATCAAGGACACTGTGCTTGCTGAGCCGAAGGCCAGCGGCAGCTATGTGTTCTATGGCAAAGACACCTCTGTGAAGGGAAGCGTGCACCAGATTCAGATTGGTGCGGTATCGGACAGCTCTGACAGCTACGAGATTAGCCAGGCGCTGGACAACTACCTGAAGGGACGACCGGTGCAGCTGGTGACTATTCAGTCTCCTAACAACGTGGTGGTGCGTACGACGGACTACAACTACGGGCTGTACATCTACACCTACCTTCAGAACATGAACGGTGGTGAGCGTGTCTTCGACAGCTGGTCACGATGGGAGTGGCCGAAGGCTCTTGGGATGTGCGTCGGCATGTGTGACGACGATGGCGTTCTGCTGGTATTCAAGCTGCGCAACCTCGACGGTAAGACGCTCCTACAGGCTGAGAGCTTCAGCTTCGAGACGGAGCTCCCGGATAACGGGTACCTGGACTGCAACCGCCCAATGGACCTGGATGTACCACGGGAACACGGACGGGCAGCGCACTACGTCGGCGGGCATGAATACTTCTTGCTGGGCTCCCGCCTTGACAAGATTGACAGCAACATGTCCTGGTGGGCAGATGACATAGAGCACCTGCGTACCGGGTTTGTCACCGAGGCATACGTGGTACCGACGTCTCCGTACATGCGCGACAGAAACGATAACCCAATCACCACAGGACGCCTGACCCTGGGCAGCTTCAAGGTTAACGTCGAGCAGACAGCTGGCTTGTACGGCTCTGTAACGACCGCTGACCGCACTTACGATATGGTTGACTACGGTGGGCGATTGCTTACTCGTAAATCGAACCAGGTGGGCCGTGTGCCCCTTGTCGATACGTCACTGTCTGTCCCGGTGTATCGGGAGATTCGTGAGTTCCAGCTGAAACTACAGGCACGCGACTGGCTCCCTCTGACCATTACTGGCCTTGAGTGGGTTGGTCAGTGGTTCAACCGTACACAGAGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d3c76accd598aba4a3f28a34b964a55347084fb3e133ab5d771532cf413e43d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of four novel bacteriophages targeting multi-drug resistant Klebsiella pneumoniae strains of sequence type 147 and 307 Ponsecchi,G., Olimpieri,T., Poerio,N., Antonelli,A., Coppi,M., Di Lallo,G., Gentile,M., Paccagnini,E., Lupetti,P., Lubello,C., Rossolini,G.M., Fraziano,M. and D'Andrea,M.M. 2024 — GenBank