Protein

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Genbank accession
AGI11565.1 [GenBank]
Protein name
DUF2479 domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MTNYIMANSYAFDGTDDFIHGVYEVDETLTTVKILLNGTDTNLNAIAGFTNGTTFMADVSTIKSQITLTTVVTMIMYNGTKELARCPVPIYSQANPPVPKSADKKYTLALDLVKDTENVVLISRIADKDLTSVLVKLTNNGEAINLVGRTPLFECQLPAQTGEYANFVRDDGIANGNMIIVDAEQGIIQYNFVKETFSKVGAINIAYFALETPVGDIVKRVTTRNFKIIVTDSAIEGKINADDYISDIESLKAEIEIRLAPVIAEMVQLKADVADASAQMDEIEALITANQVIKTEDAINWQKQKITDDTGANLLTTGSDTSKDILDIIKTAGIGLRTFYAVSGAVNNPTASTPLRGISHLTTATTGWVIGWDSFGNSYSTFLNGASGWVIPWKENATMSDVASQLSTAVDTLNTRMDSMQNIQLFDNSGVPIVNLDTDNGLDIYAELNKVPAGMYMTRISGTAGTTNPNTNVPPTTVRGYTYIEVQGTWGNLYGVGSNQTMVMNQLNSGVWQGWRVQDARDTGWINITGFNSGWTTDAGNPPAYRKVGNRVTFRGVVHMDVNAKKGIIANIPAGFRPLVGNQNGYICARQTTGALYTALVYVSSAGNLEVVWNNGNGTQGIWLSSIEYYID
Physico‐chemical
properties
protein length:632 AA
molecular weight: 68537,48630 Da
isoelectric point:4,70140
aromaticity:0,08228
hydropathy:-0,08070

Domains

Domains [InterPro]
DC_0893
ATT
1–103
DC_0893 IPR018913 Coil
G3DSA:2.60.40.3350
ATT
104–236
G3DSA:2.60.40.3350
DC_1681
STR
120–632
DC_1681
AGI11565.1
1 632
Architecture
ATT
STR
ATT 1-255 | STR 256-632
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-110
[NCBI] 		1173748 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes FSL J1-208
[NCBI] 		393119 Bacteria > Firmicutes > Bacilli > Bacillales > Listeriaceae > Listeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGI11565.1 [NCBI]
Genbank nucleotide accession
JX126919 [NCBI]
CDS location
range 23353 -> 25251
strand +
CDS
ATGACTAACTATATCATGGCAAACTCCTACGCCTTTGACGGCACGGATGATTTTATTCATGGCGTTTACGAGGTAGACGAAACATTAACTACTGTTAAGATATTACTTAACGGAACTGATACTAACTTAAATGCAATTGCAGGATTCACTAATGGGACAACCTTTATGGCTGACGTTTCCACTATCAAATCTCAAATCACATTAACCACAGTGGTTACAATGATTATGTATAATGGAACTAAGGAGCTTGCGAGATGTCCTGTTCCTATCTATAGCCAAGCTAATCCACCAGTTCCAAAATCAGCTGACAAGAAATACACTCTAGCATTGGACTTAGTTAAAGATACTGAAAACGTGGTACTAATATCCCGCATTGCTGACAAAGATTTAACATCCGTATTAGTTAAGCTAACCAACAACGGAGAAGCAATAAACTTAGTGGGGCGTACCCCGCTATTTGAGTGTCAATTACCTGCACAAACAGGCGAGTATGCTAACTTCGTTCGTGATGATGGAATAGCTAATGGTAACATGATTATTGTGGATGCAGAACAAGGCATTATCCAATACAACTTTGTTAAAGAGACTTTCTCCAAAGTAGGAGCCATCAACATTGCTTATTTTGCTTTAGAAACACCAGTTGGCGATATTGTAAAACGTGTCACAACACGTAACTTTAAAATCATTGTAACAGATAGTGCTATTGAAGGAAAGATAAATGCTGACGATTACATCTCTGACATTGAGTCGCTTAAAGCTGAGATTGAAATTAGGCTTGCTCCTGTAATTGCTGAAATGGTTCAACTGAAAGCAGATGTGGCAGATGCTAGTGCACAGATGGATGAGATAGAAGCACTGATTACAGCTAACCAAGTAATCAAAACAGAGGATGCCATAAACTGGCAGAAGCAGAAGATTACTGATGATACAGGTGCCAACTTACTTACAACTGGCTCAGACACTTCAAAAGATATTCTTGATATTATAAAAACAGCTGGAATTGGTTTACGAACTTTCTATGCAGTATCAGGTGCTGTAAATAACCCAACAGCTAGTACTCCTTTACGAGGAATTTCTCATTTAACAACGGCTACAACTGGCTGGGTAATTGGTTGGGATTCCTTCGGAAACTCCTATTCAACTTTCTTAAATGGAGCATCTGGTTGGGTTATTCCTTGGAAAGAAAATGCCACCATGTCTGATGTAGCTAGCCAATTATCTACCGCAGTTGATACCTTAAATACTAGAATGGACTCCATGCAGAACATCCAGCTATTTGATAACAGTGGTGTTCCTATAGTTAACCTAGATACTGACAACGGATTAGATATTTACGCAGAGCTTAATAAAGTTCCGGCTGGCATGTATATGACACGAATTTCTGGTACTGCTGGAACAACCAATCCCAATACTAATGTTCCTCCTACAACCGTTCGGGGATACACCTATATTGAGGTACAAGGTACTTGGGGGAATTTATATGGAGTAGGCTCCAACCAGACTATGGTAATGAACCAACTAAATAGTGGAGTGTGGCAAGGATGGAGAGTGCAGGATGCACGAGATACTGGCTGGATAAATATCACAGGATTTAATTCTGGCTGGACAACCGATGCTGGAAATCCTCCTGCCTATAGAAAAGTTGGTAATAGAGTAACATTTCGTGGAGTAGTTCATATGGATGTAAATGCAAAAAAAGGAATAATTGCTAACATACCTGCTGGATTTAGACCTTTAGTAGGTAACCAGAACGGATATATATGTGCAAGACAAACTACTGGTGCTCTTTATACTGCCCTTGTTTATGTAAGTAGTGCAGGAAACTTAGAAGTAGTGTGGAACAATGGTAATGGTACTCAAGGTATTTGGTTATCATCTATTGAATATTATATTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
76d0c0d4b96b9d83867942652d0bd0d2fc8184cbb3b8b37036af265fe24b7fe1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50