Protein

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Genbank accession
QBQ72785.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALVLKDRVKETTTTTGTGTYTLAGAEDGFQAFSAIGDGNITYYTATNAAGDWEVGIGTYTASGTTLARTTILSSSNGGSAVDWSAGEKQVFVTQPASKASYVDENGFHIGNIFEKCVELKTTVANKPAYEEGRLFYDKAFGALAFYNDESDITLQIGQEEYIRVYNDTGATLLNGTPVYLTGESGATPTVSAARADTTYAESQAVGVTTHDIENNTIGYVTVRGLIADVDTSHLTVGEPVHVAVGGGTVTESPSYPYYPTEVGVCLISAAIGGCIYVSISSETFQTMRVDGNSHFDADVTIDGDLVVNGTQTITSSNNIALSGAFSYFNSGDTIGADNTSFTGTGTNDGVFTGHYNGTSSNKTYYVRISDDQSAPDEFEWSLDNFVTIEATGIAITTDDQALEEGVNIKFNADNGHVLGDVWSGTASPTNVDTGIASNRNTGTSGVGYTHVGMYYDVSSNYWTFFDEYAPEPTGTIDTSHASFSYGDIKVNSVIGDVVGNLTGIASSATQLANNRNITLSGDVTGTAVFNGGADANITATVVNDSHTHDTRYVQLAGDTMSGTLNVPTVDFGDWTITESGGSLYFAYQGTNKLKLDTSGTLSVTNDVQTDQTI
Physico‐chemical
properties
protein length:614 AA
molecular weight: 64609,24010 Da
isoelectric point:4,15956
aromaticity:0,09609
hydropathy:-0,19381

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72785.1
1 614
Domain Start End Length (AA) Confidence
N-terminal 1 347 347 0,3148
Central domain 348 546 200 0,3035
C-terminal 547 614 67 0,8440
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-347
Central
348-546
C-terminal
547-614

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-6
[NCBI] 		2559285 No lineage information
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72785.1 [NCBI]
Genbank nucleotide accession
MK613348 [NCBI]
CDS location
range 36678 -> 38522
strand -
CDS
ATGGCACTTGTTTTAAAAGATCGTGTAAAGGAAACTACCACAACTACAGGTACGGGAACTTACACTCTGGCAGGTGCCGAAGATGGTTTCCAAGCGTTTTCCGCTATTGGGGATGGCAACATTACCTATTACACCGCCACTAACGCAGCTGGCGACTGGGAAGTAGGTATTGGGACGTACACTGCCTCTGGAACCACTTTGGCTCGTACAACCATCCTGTCGTCCTCCAATGGCGGTAGTGCAGTAGACTGGTCTGCTGGAGAGAAGCAGGTATTTGTAACTCAACCAGCGTCTAAAGCATCTTACGTTGATGAGAACGGTTTTCATATCGGTAACATCTTCGAGAAGTGCGTTGAGTTAAAGACTACTGTTGCAAACAAACCTGCTTATGAAGAAGGTCGTCTATTCTACGACAAAGCCTTCGGTGCTTTAGCGTTTTACAACGACGAGAGTGACATCACACTTCAGATCGGTCAGGAAGAGTACATTCGTGTATATAACGACACTGGAGCTACTCTACTTAATGGAACTCCAGTTTACCTAACTGGTGAATCTGGCGCTACACCTACTGTCTCTGCGGCAAGGGCTGATACCACATACGCTGAATCCCAAGCTGTTGGTGTTACAACTCACGACATTGAGAACAACACTATTGGTTATGTGACTGTACGGGGTTTGATAGCAGACGTTGATACTTCTCATTTGACAGTTGGAGAGCCTGTACACGTTGCAGTTGGGGGTGGTACAGTTACCGAATCCCCAAGCTACCCTTACTACCCAACAGAAGTTGGCGTGTGTTTGATTAGTGCCGCTATTGGAGGCTGTATATACGTTAGTATATCCTCAGAGACCTTTCAGACTATGCGTGTAGATGGTAACTCTCACTTTGATGCCGATGTTACAATAGATGGTGACTTGGTTGTTAACGGTACGCAGACAATCACTAGCAGTAACAACATTGCTTTGTCGGGTGCTTTTAGCTACTTCAATTCTGGTGATACAATCGGGGCTGATAACACTTCCTTTACAGGAACTGGCACAAACGATGGTGTTTTTACTGGTCACTACAACGGCACAAGTAGTAATAAGACATACTACGTCCGTATCAGCGACGATCAAAGCGCACCTGATGAGTTTGAGTGGTCCCTTGATAACTTTGTGACTATCGAAGCCACTGGTATCGCAATTACAACAGACGATCAAGCTCTTGAAGAGGGAGTAAACATCAAGTTCAACGCTGATAACGGGCATGTTCTTGGTGACGTTTGGTCTGGTACTGCTTCTCCTACTAATGTAGATACAGGTATCGCATCTAACCGTAATACAGGTACTTCTGGTGTCGGTTACACTCACGTTGGTATGTACTACGATGTGTCATCTAACTACTGGACGTTCTTTGACGAGTACGCACCAGAGCCAACAGGTACTATCGACACCTCACACGCCTCCTTTTCCTACGGGGACATCAAGGTTAACAGTGTCATTGGTGACGTAGTTGGTAACCTTACAGGTATCGCCTCTAGTGCCACTCAGTTAGCTAACAACCGAAACATTACCCTAAGTGGAGATGTTACAGGTACAGCCGTGTTTAACGGTGGTGCAGATGCTAACATCACAGCTACAGTAGTAAACGACAGCCATACACACGACACACGTTATGTACAACTGGCTGGCGACACTATGTCAGGGACACTCAATGTTCCTACGGTAGACTTTGGAGACTGGACTATCACTGAGAGCGGAGGTTCACTCTACTTCGCATATCAAGGTACAAACAAACTCAAGTTAGACACAAGTGGCACATTGTCTGTCACTAACGATGTTCAAACTGACCAAACTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8726e7787368b238a501a192afb762e6298dd8f2c271140488f26d490bad51d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank