Protein

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Genbank accession
UYD57887.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLGQAFRATSGLDAAGEKLINVAMADKTILSDGVSVGFFHKYNTIYEYDSTRGYDAKHAVIFERRIYYAKANIASPAGAFDVTKWTGLRVDPTWQFINSTGPALQLSSGQYITADNRFNNLVFNLPTSPVDGDTLIIKDVGGQPGVNDLEFVSIGTAVIEFKAASVGARFRATVPFCQYMFVYKAAGNRWQVDVTTTSTNSYFVEPSIQGFQLQSGMVTWRRTAAGTIRLVLPKHARHGDVITTHDIDGMNPINHSTLEIYPGSGHNINETGVTKIESRTSGYGSFVFDFPSLTWKVWDGDQRTRIRVTKTDTALLPFEHILVTGNSNLPSQTTVLTLPEEVAIGDRVQITMDYLRKGQTCTIRVSPGSNELIVGSKAQMQFQRRSEYPMTNGWELVSSISISADTDYVPYVELMYAQLDPSLVGVTSAQYGWMIGNVQPKVERVDATRRDRLGVAALADQAEVNKNHEDNPNDETIVTPKTLANKTATETRRGIARLATTAEVNQLSTSTYLDDIIVTPKKLNERTATETRRGLAEIATQSETNGSTDDITIVTPKKLHNRIASETLTGILAVVSKNGTAGTTRSTAGTGVYNKADQSKAVTPLTLDEFKATETAKGIGYIATQAEVDGGSSDPLGPLLVTAERLGARRATESNHGLIEIATQTETNTGTDDTRAITPKKLNDRTSTETRTGIARIATTAEIDAATNDLTIVTPLKLKNRFNNTARISVNTADGLTQSGTIWSTVSVGISLATEAQRGTLRVSTQLEANGSSSDDTVVTPKKLDGRKATRTLDGIIRVATTAEVRTGTATNLAVSPEDFKYIAQTEPTWSGNETRRGFVKAATVESTFVGNNTVGSTQAYTTYANDGLAVSPRGLNYALQNYLPLNATAQNSLNLGGVVSSGWVRRTVDQTITGAMNFTAPMTTQAVAGTTSTFNLAFIESNRSDALTVGSAINTGVAGITFIGGTTGSNRWKLYAGNDSAIDGIGGGGIGFAPGVVGPVFHVTTAGDSWTQRNIVSRAGSLSLESASAGISMGGSHFASVSTTDNRMNIGTGSRNVVINSAGDNAKIGIYDIVHTGNQASKLNPIYLRRDGGNTQTGKVLAEMAGDVKYSTFRNDNRYISSRGNDFVFGNTDTTNGRVCLDTNKNPIVKIGNFEYEIYHKGNKPTAQDVGAVDITGSSSNNITIRDWIKIGNVKIVANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1212 AA
molecular weight: 130238,84080 Da
isoelectric point:6,77637
aromaticity:0,07013
hydropathy:-0,28622

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD57887.1
1 1212
Domain Start End Length (AA) Confidence
N-terminal 1 834 834 0,7955
Central domain 835 1033 200 0,2345
C-terminal 1034 1212 178 0,7900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-834
Central
835-1033
C-terminal
1034-1212

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM4
[NCBI] 		3101597 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD57887.1 [NCBI]
Genbank nucleotide accession
OP380596 [NCBI]
CDS location
range 13259 -> 16897
strand -
CDS
ATGTTAGGACAAGCCTTTCGCGCCACAAGCGGCCTTGATGCAGCTGGCGAAAAACTGATCAACGTTGCAATGGCCGATAAGACAATTTTGTCCGATGGCGTTAGCGTTGGATTTTTCCACAAATATAACACAATTTACGAATATGACAGCACCCGCGGGTATGATGCAAAACATGCTGTAATTTTCGAGAGACGAATTTATTACGCGAAAGCAAATATTGCTTCCCCGGCTGGAGCTTTCGACGTCACAAAATGGACTGGTCTCCGTGTTGACCCAACATGGCAGTTCATTAACTCGACTGGGCCCGCACTTCAGCTGAGTTCTGGTCAATATATCACTGCTGACAATAGATTCAACAATCTAGTTTTCAACTTGCCAACATCACCAGTCGATGGCGATACTTTGATAATAAAGGACGTAGGCGGTCAACCAGGTGTTAACGATCTGGAATTTGTATCTATAGGAACAGCAGTCATTGAATTCAAGGCAGCCAGTGTCGGTGCTCGCTTCCGTGCAACTGTCCCGTTCTGTCAGTACATGTTCGTCTATAAAGCAGCCGGAAACAGATGGCAGGTAGATGTAACTACTACATCTACGAATAGTTATTTCGTTGAACCATCTATTCAAGGATTCCAGTTGCAGTCAGGGATGGTTACCTGGAGACGTACTGCTGCAGGAACAATTCGTCTTGTTCTGCCAAAACATGCTAGGCATGGCGATGTAATTACAACCCATGATATTGATGGGATGAACCCGATTAACCACTCGACTCTTGAGATTTACCCAGGTTCAGGTCACAATATTAATGAAACCGGTGTTACAAAAATCGAATCACGCACATCTGGTTACGGATCGTTCGTATTCGATTTTCCTTCTTTGACTTGGAAAGTATGGGATGGAGACCAAAGGACACGTATTCGTGTTACCAAAACCGACACAGCGCTGCTACCGTTTGAACACATTCTGGTGACTGGCAACAGTAATTTGCCAAGTCAGACCACAGTGCTGACTCTTCCAGAGGAAGTAGCCATAGGTGACCGTGTTCAAATCACTATGGATTATCTGAGAAAAGGTCAAACTTGTACGATCAGAGTAAGTCCAGGTTCAAACGAGCTGATTGTTGGGTCGAAAGCTCAAATGCAGTTCCAGCGTCGTTCGGAATACCCGATGACAAATGGGTGGGAATTGGTTTCATCTATTTCTATAAGTGCTGACACAGATTACGTTCCATATGTCGAACTAATGTACGCACAGTTAGACCCGTCCCTGGTGGGTGTTACTTCTGCTCAGTATGGTTGGATGATCGGAAATGTTCAGCCAAAAGTTGAACGTGTTGATGCAACTCGTCGTGATCGCCTGGGTGTGGCTGCTCTTGCAGACCAAGCAGAAGTAAACAAAAACCACGAGGATAACCCGAACGATGAAACTATTGTCACGCCAAAAACATTAGCAAATAAAACTGCTACTGAAACTCGTCGTGGTATTGCTCGTTTGGCAACAACAGCCGAAGTTAATCAGCTGAGCACTTCAACTTATTTGGACGATATCATCGTAACTCCGAAAAAGTTGAATGAAAGAACTGCTACTGAAACTCGTCGTGGTTTAGCAGAGATTGCTACTCAGTCCGAAACAAACGGATCAACTGACGACATAACAATTGTGACTCCCAAAAAGTTGCATAATCGTATTGCGTCAGAAACTCTGACTGGTATCTTAGCAGTGGTTTCTAAAAATGGAACAGCTGGTACAACTCGCTCGACTGCTGGGACTGGTGTGTATAACAAAGCCGATCAGTCGAAAGCTGTCACACCGTTAACCCTGGATGAATTCAAGGCTACCGAAACAGCTAAGGGTATAGGTTATATTGCCACACAGGCAGAAGTCGATGGGGGATCATCTGATCCACTTGGGCCTTTGCTTGTAACAGCCGAAAGATTGGGTGCTCGGCGAGCGACCGAATCAAACCATGGTTTGATCGAGATTGCAACCCAGACCGAAACAAACACTGGAACTGATGATACTCGTGCTATTACTCCCAAAAAGTTGAATGACCGCACTTCAACCGAAACTCGCACTGGTATTGCCCGTATTGCCACGACAGCTGAAATAGATGCTGCGACAAACGATTTAACTATCGTCACTCCGTTGAAATTGAAGAATCGTTTCAACAATACAGCAAGAATTTCGGTAAACACGGCTGATGGTTTGACCCAATCTGGAACCATTTGGAGCACTGTTTCGGTTGGCATAAGTCTTGCTACAGAAGCTCAACGTGGGACATTACGTGTTTCGACTCAACTTGAGGCGAATGGATCTAGTTCAGACGATACTGTCGTAACTCCAAAGAAACTCGATGGAAGAAAAGCGACAAGAACTCTGGACGGTATTATCCGGGTTGCGACAACTGCTGAAGTTAGAACTGGAACAGCTACTAATTTGGCTGTTAGCCCAGAAGACTTCAAGTATATAGCGCAAACTGAACCAACATGGTCAGGAAATGAAACACGCCGTGGGTTTGTCAAAGCAGCAACAGTAGAGTCAACTTTCGTTGGAAACAACACAGTCGGATCCACTCAAGCATACACAACCTATGCAAATGACGGTTTGGCTGTTAGCCCTCGTGGATTGAACTATGCGCTGCAAAACTATCTTCCTTTAAATGCAACTGCTCAAAATTCATTGAATTTGGGTGGCGTAGTTTCCAGCGGATGGGTTCGCAGAACAGTAGATCAAACTATAACTGGCGCAATGAATTTCACCGCTCCAATGACCACTCAAGCTGTCGCTGGGACAACATCAACATTTAATTTAGCCTTTATTGAGTCAAATCGATCAGATGCATTGACCGTTGGCTCGGCTATTAATACAGGGGTCGCTGGTATTACCTTTATTGGTGGCACGACAGGTTCCAACAGGTGGAAACTTTATGCCGGAAACGACAGTGCCATTGATGGGATCGGTGGTGGTGGTATTGGATTTGCGCCGGGTGTGGTTGGACCAGTATTCCATGTTACAACCGCAGGTGATTCATGGACACAGCGTAATATTGTATCTCGCGCTGGCAGTCTTAGCCTTGAGTCAGCTTCCGCAGGAATTTCGATGGGCGGGTCTCATTTTGCGTCGGTTAGCACAACTGACAACAGGATGAACATTGGTACAGGATCGCGCAATGTTGTGATAAATTCGGCCGGTGACAACGCCAAAATTGGAATTTATGACATCGTTCACACTGGAAACCAGGCTTCTAAATTGAATCCAATATATCTGCGACGTGATGGTGGAAACACCCAAACAGGCAAAGTCTTGGCTGAAATGGCTGGTGATGTGAAATACAGCACCTTCCGAAATGATAACCGCTATATTTCATCACGTGGAAATGATTTCGTCTTTGGAAATACCGATACAACAAATGGTAGAGTTTGTCTCGATACAAACAAAAACCCAATTGTAAAAATCGGGAATTTCGAATATGAAATTTATCACAAGGGTAACAAACCTACAGCTCAAGACGTAGGTGCAGTTGATATTACAGGTTCATCTTCCAATAATATAACGATTAGAGATTGGATCAAAATTGGTAATGTGAAAATCGTTGCCAACAACTTGACCAAGACAGTTGAGTTTATCTGGGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
014515655816a4d8add37c6476851a60153f3370f0da7ee1df928a11ea01cf95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5425
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank