Protein

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Genbank accession

WAK45437.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence RBPdetect2

Probability 0,79

Protein sequence

MYPIPALYLMLSGGGSEPLPPGSIKKVAFTRMAPSTMKRSMAILLNDGRLYTQGDNFWGECADGTTSPFYNHWFLAASNVADVFGVGKAFVVKYSNGGWQFAGDASQFTGVGDATTSWTSFPSSITGTISLSTLTSVYGANGNTLWVTDSGVLYGSGNNSNGCLGSGNSNPISTPRTISTSCVRVFALNACSTYLNNVGAPRVSGVTYGINGTSTSQTTSFVSVTFPASETVYVKEWLSNESNSVAIASTGADDNQHYLYTRGITTDSKTYTKVTGFGPFETFRVIDGGESKFFIADDVLYAIGDMPGVLGLGAGSSSVTVPSPVPVPTGEDWDLSKLTCVADMKGENLTQGGSLSHWMVYDGNLFYTGEPQAFFNSASPVTKFTNIPETSFEGIAADSITTGSIGIAIVGATKQLTWSIDPPGAEIYDLQFTSSHPEFATVDEDGLMTFVAEGGFDITMTAKTGSGSNMKTLTDTSGGYASTMGMATDSLSAMVVGETKQLVYTVTPEGVENLDGYTITFSSEDPAVATVDETGLITAVADGGTRIHATAKLQTVTADDSSYLSVDAAP

Physico‐chemical properties

protein length:	570 AA
molecular weight:	59644,49000 Da
isoelectric point:	4,34116
aromaticity:	0,10000
hydropathy:	-0,02263

Domains

Domains [InterPro]

IPR009091
STR
17–200

IPR009091 DC_0179 IPR008964

IPR009091
STR
40–406

IPR009091 IPR008964 DC_0078

DC_0918
STR
78–205

DC_0918 G3DSA:2.60.40.1080 IPR003343

IPR003343
STR
396–472

IPR003343 G3DSA:2.60.40.1080

IPR003343
STR
409–471

IPR003343 IPR003343

WAK45437.1

1 570

Architecture

STR

STR 17-570

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009091	STR	IPR009091	17	200	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	40	406	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
DC_0918	STR	DC_0918	78	205	Novel HMM	DC_0918	Central	Low	Positional only	78 proteins / 78 hits
DC_0179	STR	DC_0179	329	493	Novel HMM	DC_0179	Central	Low	Positional only	58 proteins / 58 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	395	475	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	396	472	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	409	466	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	409	471	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
DC_0078	STR	DC_0078	466	570	Novel HMM	DC_0078	Central	Low	Positional only	51 proteins / 51 hits
IPR003343	STR	DC_0008	481	561	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	484	566	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR008964	RBD	IPR008964	493	551	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	493	553	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WAK45437.1

1 570

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	82	82	0,0016
Central domain	83	420	339	0,7993
C-terminal	421	570	149	0,0626

Note: Constraints were applied during segmentation.
Fixed 36 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-82

Central
83-420

C-terminal
421-570

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Cronobacter phage EspYZU14 [NCBI]	2996060	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Cronobacter sakazakii [NCBI]	28141	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WAK45437.1 [NCBI]

Genbank nucleotide accession

OP850600 [NCBI]

CDS location

range 21301 -> 23013
strand -

CDS

ATGTATCCTATTCCCGCTCTTTACCTGATGTTGTCAGGAGGCGGATCTGAACCGTTGCCACCAGGTAGCATTAAAAAGGTTGCATTTACAAGGATGGCCCCTTCCACCATGAAAAGGTCGATGGCTATCCTCCTTAACGATGGACGACTTTATACTCAAGGTGATAACTTCTGGGGAGAGTGTGCTGACGGCACAACAAGCCCATTTTACAACCATTGGTTCTTGGCTGCAAGTAATGTAGCAGATGTCTTTGGTGTTGGAAAGGCTTTCGTAGTAAAATATTCAAACGGTGGTTGGCAATTTGCGGGTGACGCCTCCCAATTTACCGGGGTAGGTGATGCTACTACTTCCTGGACCAGCTTTCCATCTTCCATTACTGGAACAATCTCTCTTTCAACCCTTACCTCTGTGTACGGAGCAAACGGAAATACCTTGTGGGTTACCGATAGCGGGGTACTGTACGGGAGTGGGAATAACTCGAATGGTTGCCTTGGGTCTGGAAACTCAAACCCTATTTCAACCCCTCGTACAATAAGCACATCCTGTGTGAGGGTATTTGCTCTCAATGCGTGTTCTACCTATTTGAACAATGTTGGCGCTCCCCGTGTAAGCGGGGTTACTTACGGCATCAATGGGACATCAACCAGCCAAACAACAAGCTTTGTGAGCGTAACCTTCCCTGCATCGGAAACGGTGTATGTCAAGGAATGGTTGAGTAATGAAAGTAATTCTGTAGCTATCGCATCCACAGGTGCAGATGATAATCAGCACTACCTTTACACAAGAGGTATTACCACGGACTCGAAGACTTACACCAAGGTTACGGGCTTCGGTCCTTTCGAAACCTTCCGTGTGATAGATGGTGGAGAATCTAAATTCTTCATCGCAGATGATGTTCTTTACGCAATTGGAGATATGCCGGGAGTTCTCGGTCTTGGTGCGGGATCTTCTTCAGTCACAGTGCCAAGCCCTGTTCCCGTCCCTACTGGGGAGGATTGGGATCTGTCTAAACTTACCTGTGTTGCAGATATGAAGGGTGAAAACCTGACCCAGGGTGGTAGTTTAAGTCACTGGATGGTATATGATGGAAATCTGTTTTACACCGGAGAGCCGCAGGCGTTTTTCAACTCCGCATCACCAGTGACTAAGTTTACAAACATACCTGAGACCTCCTTTGAGGGTATTGCAGCCGATTCTATCACCACAGGATCAATCGGGATTGCCATTGTGGGCGCGACTAAGCAACTCACATGGTCAATCGATCCTCCTGGTGCAGAGATTTATGACTTGCAGTTTACCTCAAGTCATCCTGAGTTCGCAACAGTTGATGAAGATGGGCTGATGACGTTTGTCGCTGAAGGTGGTTTTGACATCACGATGACTGCCAAGACAGGATCTGGTTCAAACATGAAGACCTTGACAGACACATCAGGTGGTTATGCCTCTACAATGGGAATGGCTACGGATAGCTTGTCGGCTATGGTGGTTGGGGAAACTAAACAGCTTGTTTATACAGTCACCCCTGAAGGTGTCGAGAACCTGGATGGTTATACTATAACCTTCTCCAGCGAAGACCCGGCAGTAGCAACTGTTGATGAAACAGGTCTTATCACCGCAGTCGCTGATGGCGGAACACGTATCCATGCCACAGCAAAATTGCAGACGGTCACCGCAGACGACAGTTCTTATCTTTCTGTCGATGCAGCACCATAA

Genome Context

Tertiary structure

PDB ID

f8e3454b41e17fd7ff6b8be867cd7b4170bdfa3b94b5a9f4e7ad65acbf83755f

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8475

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence