Protein

View in Explore
Genbank accession
UFK08775.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MYINNGRINYNNEYGYRRGIYREPFYSDNADYNTNSKSYYDYLARFDGFIFELCEFVNGLADDIQKMKDTYEALTLSNTDVTYTVGQKGDFDTLNHCFEHIENLIVQPKSIRVILLKDYMMREQLFLRDKRYNHITITSENDIVEAYETELNRQIEIKTNPIFRVKPLFYGINSTFPKIDFKLQNKDFSDTINCGFLMDNTTFEMTERGGSTHFNFIGLCGVNGSHIQTNYCDFSYNGNREQLEEYNKDQNMYGDGLRIFNSSLTGNYMTVNRCGEIGIHFSHGASGYIDFTEARFNGHHGLMVTTGSQASARNCKITDTIDDNVVSYASSDIDLRSSDCSNSQTTYGVIATRSSNINFDKGIANGCGASGIMANRGCSIDATGATASRNKWHGVIASNNSKVDFTSGNANENGLDGIQCTHGSTVQARLSTTNGNKRNGVLAYAGDVYCQEINCDGNGRRGLEATRGGYVAAYGAKVSRSKDDNVLAYGSVISVNEAVIERAGRNGIEATRGGQIFADRITITGSGDFGILAYASKVFAEASNISGTKNEPVYATRGGEITCFGSNISSNKTVYNVYNGSRIFTDKDHGYSTNVDPQTLSSKGLIILG
Physico‐chemical
properties
protein length:609 AA
molecular weight: 67304,59490 Da
isoelectric point:5,63623
aromaticity:0,10509
hydropathy:-0,47471

Domains

Domains [InterPro]
DC_1478
STR
4–609
DC_1478
IPR039448
ENZ
301–448
IPR039448
IPR012332
STR
378–608
IPR012332
UFK08775.1
1 609
Architecture
STR
STR 4-609
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UFK08775.1
1 609
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0798
Central domain 11 587 578 0,9358
C-terminal 588 609 21 0,5196
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-587
C-terminal
588-609

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SurP-PSU3
[NCBI] 		2894773 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus ureilyticus
[NCBI] 		94138 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK08775.1 [NCBI]
Genbank nucleotide accession
OK574338.1 [NCBI]
CDS location
range 3840 -> 5669
strand +
CDS
ATGTATATAAATAACGGTCGAATCAATTATAATAATGAATACGGGTATCGTCGTGGTATATATCGTGAACCATTTTACAGTGATAATGCAGATTATAATACCAATTCAAAATCATATTATGATTACTTAGCACGTTTCGATGGTTTTATTTTTGAATTATGTGAATTTGTTAATGGTTTAGCTGATGATATTCAAAAAATGAAAGACACATACGAGGCATTAACATTATCAAATACAGATGTGACTTATACAGTAGGACAAAAAGGTGATTTTGATACATTGAATCATTGCTTTGAACATATTGAAAATTTAATTGTTCAACCTAAATCTATACGTGTCATTTTACTTAAAGATTATATGATGCGCGAACAATTATTTTTACGTGATAAGCGTTATAATCACATTACGATTACATCAGAAAATGATATTGTTGAAGCCTATGAAACAGAATTAAACAGACAAATAGAAATTAAAACAAATCCTATTTTTAGAGTAAAACCCCTATTTTATGGTATTAATTCTACATTTCCTAAAATTGATTTTAAACTACAAAATAAAGACTTTTCAGATACCATTAATTGTGGTTTCTTAATGGATAATACAACGTTTGAAATGACTGAACGTGGAGGTTCTACACACTTTAATTTTATTGGTTTATGTGGTGTCAATGGTTCACATATTCAAACCAACTATTGTGATTTTTCGTACAATGGCAATCGTGAACAATTAGAAGAATATAATAAAGACCAGAATATGTATGGTGACGGATTAAGAATTTTTAATTCATCATTAACAGGTAATTATATGACAGTCAATCGTTGTGGTGAAATTGGAATACACTTCTCACATGGTGCAAGTGGTTATATTGATTTTACCGAAGCAAGATTTAACGGACATCATGGTTTAATGGTGACTACAGGTTCACAAGCCAGTGCAAGAAACTGTAAAATCACTGATACAATTGATGATAATGTTGTAAGTTATGCGTCAAGTGATATTGATTTAAGAAGTAGTGATTGTTCAAATTCACAAACAACATACGGTGTCATTGCAACACGTTCATCAAACATTAACTTTGATAAAGGCATTGCTAATGGTTGTGGTGCAAGTGGTATTATGGCAAACAGGGGTTGTTCTATTGACGCAACAGGTGCAACGGCTTCACGTAATAAATGGCATGGTGTCATCGCAAGTAACAACTCAAAAGTTGATTTCACAAGTGGTAACGCGAATGAAAATGGACTTGACGGAATCCAATGTACACATGGTTCAACTGTACAAGCAAGATTATCAACAACGAATGGAAATAAACGTAATGGTGTGTTAGCTTATGCAGGTGATGTGTATTGTCAAGAAATTAATTGTGACGGTAACGGTCGTCGTGGATTAGAAGCTACACGTGGCGGATATGTCGCTGCATATGGTGCGAAAGTATCACGTTCAAAAGATGATAACGTATTGGCATATGGTTCAGTGATTTCTGTCAATGAAGCAGTGATTGAACGTGCAGGGCGTAACGGTATTGAAGCCACACGTGGAGGACAAATATTTGCAGATAGAATTACAATCACAGGTAGTGGTGACTTTGGTATTTTAGCTTATGCGTCTAAAGTATTTGCCGAAGCGTCAAATATTAGTGGTACTAAAAATGAACCTGTTTATGCGACACGTGGTGGGGAAATCACTTGCTTTGGTTCAAATATTTCAAGTAACAAAACAGTTTATAACGTGTATAATGGTAGTAGGATATTTACAGATAAAGACCATGGATATTCTACCAATGTTGACCCTCAAACATTATCAAGTAAAGGGTTGATTATTCTAGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fcf5a543e981a43d813ca2fbd8ef3ac2ba7baf880d83bb08449f873ca7fb8f86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus virus vB_SurP-PSU3 Kwon,H.M., Park,S.Y. and Kim,J.H. 2016-07-06 — GenBank