Protein

View in Explore
Genbank accession
AZU98481.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFARILDYGNKAPLPSSIISTYVGSQSFYALSTDKVLYSTGDNALGQLGLGDTETRNEWVRCDTGVDEVYTGMASYAVLIRKGNSIYLSGKNTLYTGNDNGTYTKFTLIIPDISTIYEYADCYIKDIQVNDNSMMVLVGRISDSNYGALYSQGKGVTLGQGNNTPAHYALALCSTAPKTIMSISASAFNCFITTVNSNILAVGNNSFKQVANTSTSTYNVYTQATLTSQNIHCGDYVVIAIRTDGIYIRGNTPNGTISDFQRILSFSTDLVTARNMVCSYNTRGVVVVIPPEVQGLQSGLYVLGQQFDVNGVVGVVNSFRFMYSEIFDKVQGGFNHYVYKNSTGFYISGANLQFLPGKDDTAALRPMILPTN
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40681,40240 Da
isoelectric point:5,91514
aromaticity:0,10963
hydropathy:-0,01257

Domains

Domains [InterPro]
DC_0433
ATT
1–166
DC_0433
IPR009091
STR
9–273
IPR009091
IPR009091
STR
15–281
IPR009091
AZU98481.1
1 374
Architecture
ATT
STR
ATT 1-166 | STR 167-281 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU98481.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,2473
Central domain 103 301 200 0,1478
C-terminal 302 374 72 0,6550
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-301
C-terminal
302-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Munch
[NCBI] 		2500169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU98481.1 [NCBI]
Genbank nucleotide accession
MK268344 [NCBI]
CDS location
range 347452 -> 348576
strand -
CDS
ATGATACCGTTTGCTAGGATATTGGATTACGGGAATAAAGCCCCCTTACCATCCTCAATAATTTCGACATATGTTGGTTCACAATCGTTCTATGCATTAAGTACTGATAAAGTTCTTTATAGTACAGGGGATAATGCATTGGGGCAATTGGGGTTAGGTGATACAGAGACCCGTAATGAATGGGTTCGGTGTGATACAGGAGTTGATGAAGTTTACACTGGTATGGCATCATATGCGGTATTAATAAGAAAAGGCAATTCGATATATTTAAGTGGTAAGAATACCTTATATACAGGAAATGATAATGGGACGTATACTAAATTCACATTAATAATCCCGGATATTAGTACTATATATGAATACGCTGATTGCTACATAAAGGACATACAAGTGAATGATAATAGTATGATGGTATTAGTTGGAAGGATATCTGATTCTAATTATGGTGCTTTATACTCTCAGGGAAAAGGGGTGACATTAGGGCAAGGAAATAATACACCTGCACACTATGCTTTAGCGTTATGTAGTACTGCTCCGAAAACGATTATGTCTATAAGTGCGAGTGCATTTAATTGTTTTATTACTACTGTGAATTCTAACATATTAGCTGTTGGTAATAATTCATTTAAGCAGGTTGCGAATACCTCGACGAGTACTTATAATGTATATACTCAAGCCACGTTAACTTCACAAAATATCCATTGTGGAGATTATGTTGTAATTGCGATAAGGACGGATGGTATATATATACGAGGTAATACACCGAATGGTACGATTAGTGATTTTCAGCGTATATTATCTTTTAGTACTGATTTAGTTACGGCACGTAATATGGTATGTTCATATAATACAAGGGGAGTAGTTGTTGTTATACCACCGGAAGTACAGGGTCTACAGAGTGGTTTATATGTATTAGGTCAGCAGTTTGATGTAAATGGTGTAGTGGGTGTAGTTAATTCGTTTAGATTTATGTATAGTGAAATATTTGATAAGGTACAGGGTGGATTTAATCATTATGTATATAAGAACAGTACTGGATTTTATATATCTGGTGCTAATTTACAATTTTTACCGGGAAAAGATGATACAGCGGCATTAAGGCCGATGATTTTACCAACAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aef708f86d8f3ff7a5ecadcca0233b2cef8727ebfe9b9f4bc857a9fb860799c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella myophage Munch Crosby,S.T., O'Leary,C.J., Xie,Y., Gill,J. and Liu,M. 1988 — GenBank