Protein
View in Explore- Genbank accession
- XNS45898.1 [GenBank]
- Protein name
- receptor binding tail protein
- RBP type
-
TSPTSP
- Protein sequence
-
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQASAGTMASMKTNVCASADLHMDISFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGVDAMRHPWMRTTGVNSICLRGETLNRNMYGHMGPRYGQSSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFSGNPTVGNNGYVHFNQPLTRPDNGAEFGQGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPTTTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
- Physico‐chemical
properties -
protein length: 658 AA molecular weight: 73314,50470 Da isoelectric point: 8,00480 aromaticity: 0,10790 hydropathy: -0,42158
Domains
Domains [InterPro]
IPR059609
RBD
1–658
RBD
1–658
1
658
Architecture
RBD 1-658
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
658
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0025 |
| Central domain | 11 | 209 | 200 | 0,4580 |
| C-terminal | 210 | 658 | 448 | 0,9230 |
Note: Constraints were applied during segmentation.
Fixed 16 C-terminal predictions appearing before Central domain
Fixed 16 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-209
11-209
C-terminal
210-658
210-658
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_KpnS_Boggle_ER46 [NCBI] |
3375003 | Viruses > |
| Host |
Klebsiella pneumoniae JHCK1 [NCBI] |
1236101 | Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XNS45898.1
[NCBI]
Genbank nucleotide accession
PP738782
[NCBI]
CDS location
range 109942 -> 111918
strand -
strand -
CDS
ATGGGCTTTTATGCAGGAAGGATAGGCGACAAAAAAGTGTTGTCTCTTACCTCTGGCAACAATAAAGACGTTAATAACCACACTAATCCAGGTTGGGATACTATATTCCATAGCGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAAAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGATAGGATTATTCAGGTACTGTCCGCAGATTACGACAGAGTAGTATTGACTGAAGTTGAGTTTGAGGATGGTACTAGACGTTTCATTTATGGTACATCCCTGGGTGTGGGCGCTAAAGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGCTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATATTAGTTTCTATTTCGAAGAGACGCCAGGTACTATTAACGAGAAGCTACGAGACGGTACTGGGTGTATGTACACCTGGGGCGTTAACTCAGAATGGGGAGACAGAGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCTCTTACTATTGGTGTTGATGCTATGCGCCACCCATGGATGCGTACCACAGGAGTTAATAGTATATGTTTGCGTGGTGAGACTCTCAACCGTAATATGTACGGACATATGGGGCCTAGATATGGGCAGAGCTCCAATCCCGTTGGTGGTCCTTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGTTTTTTCCGTGGTCCGCCCAATAACTTTATGGGGTGGGAGAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACTGGGTGGAAGTTCATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGGCCTGATATCCGAGTTATTGCAACCAACGTCGCCAGATTTAGTGGCAACCCTACTGTTGGTAATAATGGGTATGTTCACTTCAACCAGCCTCTAACTCGACCAGATAATGGTGCTGAGTTTGGGCAAGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCTAACCCACCGGAAATTGGAAACCAGTGGGGTCCAGTATGGTCCGAAGCAACTCGACCTCTTCGCCTAGTGGGCGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCAGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCTGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGCGAGGTAGATAGTAGGCTGAGAATTTTCGGAAATCACTTCCAGAAACGCGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACTCAGTGTGGGGTTATTCCTGGGAACAACGCCATGCAAATGAAGGCTATGTGGGCACCTACTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGGGCTGATGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
699c168bed5b82c78b59a5d188c639e1b810259e0bd9760cbb67b17ff691da40
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50