Protein

View in Explore
Genbank accession
UVN13236.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVVASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVSATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFNPNTKLTLGAFNDSQYTRMVNSAAKDVGIAAMTSYGDAAMSFFNYEASTPTGNRAAVISFVRNGARGVLFGLDTDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHSGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVRPGVVVGGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:962 AA
molecular weight: 103149,53550 Da
isoelectric point:6,08276
aromaticity:0,10707
hydropathy:-0,24054

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–689
DC_1788
UVN13236.1
1 962
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-689 | RBD 690-962
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVN13236.1
1 962
Domain Start End Length (AA) Confidence
N-terminal 1 400 400 0,8936
Central domain 401 605 206 0,3152
C-terminal 606 962 356 0,8133
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-400
Central
401-605
C-terminal
606-962

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_FBPa10
[NCBI] 		2969602 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVN13236.1 [NCBI]
Genbank nucleotide accession
ON857929.1 [NCBI]
CDS location
range 27107 -> 29995
strand -
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACTTCTTCCACTGGCTTCGCTAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAGATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGGCAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTATGAACAGAATGCAGAAGTCGTGCGAGTCGGCAATGACGGCATAATGCGACGTTATCGTTCCATGGTGAATGCCAACGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCCTGGTCGGTGATGCGCTCCAACATACCGATGCCAGCTGGAGGGCCAGGCCTATCTTCTGGCGGAGAAGTCATAACGACCGGCCGCAACTTCAATGACCTGTTGAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTCGTCGCTTCTCAGAACGCCCCCGTATATCCCGCTTCGGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATTCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAACACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAGTGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCAATCCGAACACTAAGCTTACGTTGGGCGCATTCAACGATAGCCAATACACCAGGATGGTAAACAGCGCCGCGAAGGACGTAGGGATAGCCGCCATGACAAGTTATGGCGACGCGGCTATGTCGTTCTTCAACTATGAGGCTTCGACGCCGACCGGGAATCGTGCTGCTGTAATTTCGTTTGTTCGTAACGGGGCACGAGGCGTTCTGTTCGGCCTGGACACGGACAACAAGCTGAAATGGGGCGGCTATTCTCTAGGTGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACAACTACATCAACCAGGCGCTGGTTCAGGTAGGTCTTGGCGGCGTCGGTTCCTATGGCATCTTTGCGGTTCTGGACAATGCCGCTCCAACCGCGACCGTTCGACCGGGAGTGGTTGTGGGCGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2b448b0b8582509e101f63e402be8c807f0b34fa6f5bdbb47b653acafe390d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6050
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Fagenbank pseudomonas phage collection van den Berg,D.F., Costa,A.R., Esser,J.Q., Muralidharan,A., Estrada Bonilla,B., Haagsma,A.C., van der Steen,B.A., van den Bossche,H., Nobrega,F.L., Haas,P.-J. and Brouns,S.J.J. 2024-11-19 — GenBank