Protein

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Genbank accession
XYR93610.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVLFSNNALTVLAAAVGQNEVTSTITVATGAGQRFAAPTNGDYQVITLSDPLYTRFEICHLTARTGDTLTVLRGQEGTTKQAWDVGDRIYASFTASTVGLFLRADTPASISGLWDFSTPPLINGNNIWHSGNVTPADRTKAQTISGLWTFTTLPKFNAFNFVTTQGATMVGPFLLYGSPTQDNEAATKLYVDNLAAGLHDKEAVVAASTDAGGNVNITSAPSTLDGVTLVAGNRILLKNQTNKTQNLIYVFNAVGQPLTAASDSDETGDLKAGSTVFVTGGTVNKNSRWTVITTDPITIGTTPIEWTQTSGAGQIRSGPGIKIIGDQISADVPSAGGLTVSVADGIGLSVMQDLVVNTGAATAGTTGASLRYNSITVDKFGRVVNATNLPYALTTGAVFTGALTRTSTPSSGNDITTVDFVQNAIVSISTMRQPVAAVATSNVSLSGLGFIDGYQVKLGERVLVAGQTTQTANGVYVTTANAWVRASDFNSTSSLAAGVMFPVQNGTTFKNQIFMLSTQGTISIGTTPITFQRVTGTGLINKASGGGIDIVNDSIGLETQSGLTAGTYNTARVTVNSKGIITGIEAGSSGVTSFNGRSGVVMPATNDYTFAMLGGKPTTLAGYGITDPVMLRTGGTITGVVSIDYGNPAATDGPYPLLFMRLTEGERNTNKVGMNIIKEDRNSWAITAVAGSDVVNITNGSKLNLRFQTAMVNDAEILTDANFDAWTAVAFSTGNTTRNAVARGCYMVDTTSLAGTLVLPSNPAPGTAVRVLDAGGTFGTKNLTISRNNARIVGALEDLVLDKNNGGVTLVYYNAARGWVPFFS
Physico‐chemical
properties
protein length:825 AA
molecular weight: 85709,13930 Da
isoelectric point:5,48123
aromaticity:0,07152
hydropathy:0,06873

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR93610.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 625 625 0,9852
Central domain 626 814 190 0,0821
C-terminal 815 825 10 0,9932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-625
Central
626-814
C-terminal
815-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-16
[NCBI] 		3447918 Viruses > unclassified bacterial viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR93610.1 [NCBI]
Genbank nucleotide accession
PV764603 [NCBI]
CDS location
range 200029 -> 202506
strand +
CDS
ATGAGCGTCCTGTTTTCTAACAACGCATTGACGGTGTTGGCAGCAGCGGTCGGTCAGAACGAGGTTACCTCGACTATCACTGTAGCAACTGGTGCGGGGCAGCGTTTCGCTGCCCCCACCAACGGTGACTATCAGGTCATTACGCTCTCCGATCCCCTGTATACCCGATTCGAAATCTGCCATCTAACTGCGCGCACGGGCGATACCCTCACTGTGTTGCGAGGGCAGGAAGGTACTACCAAGCAAGCGTGGGACGTTGGCGACCGCATTTATGCGTCCTTCACGGCGTCTACGGTCGGTCTCTTCCTGCGCGCTGACACTCCTGCGTCAATTAGCGGGCTGTGGGACTTCAGTACGCCGCCGCTAATCAATGGTAACAACATTTGGCATTCCGGCAACGTCACGCCTGCTGATCGTACCAAGGCGCAGACTATCTCCGGGCTCTGGACGTTCACGACGCTGCCCAAGTTCAACGCATTTAATTTCGTGACGACTCAGGGCGCAACTATGGTTGGGCCCTTTTTGCTTTATGGGTCCCCGACTCAGGACAATGAGGCTGCCACCAAGCTGTATGTGGACAACCTCGCCGCCGGTCTGCACGATAAGGAAGCAGTGGTCGCAGCCAGTACCGATGCCGGTGGTAATGTCAATATCACCAGCGCCCCGAGTACGCTGGACGGTGTGACTCTTGTGGCAGGAAATCGCATTCTGCTCAAGAATCAGACGAACAAGACCCAGAATTTGATCTACGTGTTCAACGCAGTTGGCCAGCCCCTTACCGCTGCTTCGGACAGCGATGAGACGGGTGATCTAAAGGCAGGTAGTACCGTATTCGTCACAGGCGGTACCGTCAACAAGAACTCGCGTTGGACCGTCATCACCACTGACCCGATCACCATTGGCACCACTCCCATCGAGTGGACTCAGACGTCGGGTGCTGGCCAGATTCGTTCTGGCCCCGGCATCAAGATCATTGGTGACCAAATCAGCGCAGACGTTCCTTCTGCTGGTGGCCTGACAGTATCGGTTGCAGATGGCATTGGCCTGTCTGTGATGCAAGACCTAGTGGTCAATACCGGGGCTGCCACCGCTGGAACCACGGGTGCCTCCCTGCGCTACAACAGCATCACGGTGGATAAGTTTGGTCGGGTAGTTAACGCTACCAACCTACCTTATGCTCTGACCACTGGCGCAGTGTTTACGGGAGCCCTCACTCGCACTTCGACTCCTTCTTCCGGCAACGACATTACCACTGTAGACTTTGTGCAGAATGCCATCGTCTCTATCAGCACCATGCGTCAGCCGGTTGCTGCGGTGGCTACGTCCAACGTTTCCCTAAGTGGCCTAGGCTTTATTGACGGGTATCAGGTCAAACTCGGCGAGCGTGTTCTCGTTGCAGGACAGACTACGCAGACTGCCAACGGTGTTTATGTCACCACGGCTAACGCGTGGGTGCGTGCTTCGGACTTTAACAGCACTTCGTCCCTCGCCGCTGGCGTCATGTTCCCGGTTCAGAACGGTACCACGTTCAAGAATCAGATATTCATGCTGTCCACTCAGGGCACCATCAGTATCGGTACTACCCCGATCACCTTCCAGCGTGTAACGGGTACGGGCCTGATTAACAAGGCTTCGGGTGGTGGCATTGATATTGTCAATGACTCTATCGGTCTCGAAACGCAGTCAGGACTGACCGCAGGCACCTACAACACTGCTCGCGTCACTGTGAACAGTAAGGGCATTATCACTGGCATCGAGGCAGGCTCCTCGGGCGTGACCTCGTTTAATGGCCGTAGTGGCGTTGTGATGCCCGCTACGAACGATTACACCTTCGCTATGTTGGGTGGCAAGCCCACCACCCTCGCAGGCTACGGCATTACCGACCCGGTCATGCTCCGCACTGGCGGCACGATCACTGGTGTTGTGTCCATTGACTACGGCAATCCAGCTGCAACGGACGGTCCGTACCCACTGCTGTTCATGCGTCTTACCGAAGGTGAGCGCAATACCAACAAGGTTGGTATGAACATCATCAAGGAGGATCGCAATTCTTGGGCCATCACTGCTGTAGCTGGTTCGGATGTAGTCAACATCACTAACGGCAGCAAGTTGAATCTGCGGTTCCAAACCGCAATGGTTAACGACGCTGAGATTCTCACTGACGCCAACTTTGATGCGTGGACTGCCGTTGCGTTCTCTACGGGTAACACCACTCGTAACGCGGTCGCGCGTGGGTGCTACATGGTAGACACTACCTCCCTTGCTGGTACGCTGGTACTGCCCTCCAATCCTGCTCCGGGCACAGCTGTTCGTGTTCTCGATGCTGGTGGTACGTTCGGTACCAAGAACCTGACTATCTCGCGCAACAACGCTAGGATCGTAGGCGCGCTGGAAGACTTGGTTTTGGACAAGAATAACGGTGGCGTCACGCTGGTTTACTACAACGCTGCACGTGGTTGGGTCCCGTTCTTTAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
de9481c00a691387c19185fe0bd2e81c8f4fe8a78f28ef24cfe9d4c68db1c378
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50