Protein

View in Explore
Genbank accession
QBX26333.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MATEEAAGRLNLFDDPSPLPNTKNINILVEGIRKKTRGADVRESIAKALEVTYETASKDGNANMEVAKARGGFDTLSQNLMSINANADAANQKASKLTNDKVDKNGAAQVTWAMLAQDAREQIAGSKVAVVGNNAVSSANIVNGSVTDEKLDERMGFGLMIAGRLTIDAKNSTVTLANGSWFQVGKRKANVNKNLSASLPKEAVSQYVIYNDETNELYVRNLGNISNIGNRETILAILFKGILLHPQSSPFVKTIGLKIGERSDYIDANWGTVIQGQIIFDPKTRTIKGKREGNDFIIACDGYFVNAIDEFELTFNSASGNLLLFDRDTKTFQITTMYSYPDYRQTDVPKTASLVKIAEIYLNEIRHISHERNFVNTDKLASAQSTITLEQLKIDLQTKRTVFVTLGDSTTDGFRTTEYSGNVLERLTDKPNSYTEILNKIVNSQKDYAFNHKFYNRGFSGKTINWLRQNLDAVLSPISESIDYAFIAMGINDMVYDVSNIKSFRDDHINVVNRLLAKGIKPVLMSTQAEFENYKRFGSKINAIADNIKKDLASELGIPFIDYNAGTSNILNHSEYKLKDLIPDMCHFGDLGHQKGAEFLASQLIHQTVFVSGISKIGYQNNKVASDLNYSDYLTDDQKDVKWITRTDGFDLEGQLNSTQTKTMFEVSVYVERPSIVHYFGDNVILTSNGQSLSDGTILDVGFYRITAKNRPGVVSKFRGLKFNLKEV
Physico‐chemical
properties
protein length:728 AA
molecular weight: 80924,33090 Da
isoelectric point:6,60022
aromaticity:0,08654
hydropathy:-0,34286

Domains

Domains [InterPro]
DC_0719
STR
1–570
DC_0719 DC_0744
Coil
Unmapped
80–100
Coil SSF52266
IPR036514
STR
401–612
IPR036514
cd00229
ENZ
404–603
cd00229
IPR013830
ENZ
406–594
IPR013830
QBX26333.1
1 728
Architecture
STR
RBD
STR 1-612 | RBD 613-728
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX26333.1
1 728
Domain Start End Length (AA) Confidence
N-terminal 1 386 386 0,9776
Central domain 387 585 200 0,5927
C-terminal 586 728 142 0,5356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-386
Central
387-585
C-terminal
586-728

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan316
[NCBI] 		2548104 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26333.1 [NCBI]
Genbank nucleotide accession
MK448904.1 [NCBI]
CDS location
range 30541 -> 32727
strand +
CDS
ATGGCAACAGAAGAAGCAGCAGGACGTTTAAATTTATTTGATGATCCATCGCCACTACCAAATACTAAGAACATCAACATTCTAGTAGAAGGTATCAGGAAGAAGACGAGAGGTGCTGATGTTCGTGAGTCTATTGCGAAAGCACTTGAAGTCACGTACGAAACAGCATCCAAGGACGGTAATGCGAATATGGAAGTTGCAAAGGCCAGAGGTGGATTTGACACACTTTCGCAAAATCTTATGAGCATAAATGCTAATGCGGATGCTGCTAATCAAAAAGCCAGCAAACTTACCAATGACAAAGTTGACAAAAACGGCGCTGCGCAAGTTACTTGGGCAATGTTAGCACAAGATGCACGAGAGCAAATCGCTGGGTCAAAAGTGGCAGTCGTTGGAAATAACGCTGTTAGCTCTGCTAATATTGTTAACGGCTCGGTTACGGATGAAAAACTGGATGAGCGCATGGGTTTTGGTTTAATGATAGCAGGGCGATTAACAATTGACGCAAAAAACTCTACAGTTACATTAGCCAACGGAAGTTGGTTCCAAGTCGGTAAAAGAAAAGCTAATGTGAATAAGAATTTATCAGCATCTTTGCCAAAAGAAGCAGTAAGCCAGTACGTTATATACAATGATGAAACTAATGAATTGTATGTGAGAAATCTTGGAAATATTAGCAATATCGGCAATAGAGAGACCATTCTTGCTATTTTATTCAAAGGAATACTTTTGCATCCACAATCTTCTCCTTTCGTCAAGACTATTGGATTAAAAATTGGTGAGAGAAGTGACTATATAGATGCCAACTGGGGTACTGTGATTCAAGGGCAAATTATATTTGATCCAAAAACACGAACGATAAAAGGCAAACGTGAGGGAAATGATTTCATCATCGCCTGCGACGGATATTTCGTCAACGCAATTGATGAATTTGAACTTACATTTAATTCAGCGTCTGGGAACTTATTGTTGTTTGATAGAGACACTAAAACTTTTCAGATCACAACCATGTATTCTTATCCAGATTATCGACAAACTGACGTGCCAAAAACGGCATCTCTAGTCAAAATTGCGGAAATATATTTGAATGAAATCCGACATATATCTCATGAAAGAAATTTTGTTAACACCGACAAATTGGCTTCTGCTCAGTCGACAATCACATTAGAACAGCTTAAAATCGACCTGCAGACTAAAAGAACTGTTTTTGTAACATTAGGAGATAGTACAACCGATGGATTCAGAACAACTGAATATTCAGGAAATGTTCTTGAAAGACTGACCGATAAACCTAATAGCTACACCGAAATTTTGAATAAGATTGTAAATAGTCAAAAAGATTATGCATTCAACCATAAATTTTATAATCGAGGATTTTCAGGAAAAACCATTAATTGGCTTCGTCAAAATCTGGATGCTGTTCTATCTCCGATATCTGAATCTATTGATTATGCGTTCATTGCAATGGGCATCAACGATATGGTATACGACGTGAGTAATATTAAATCATTTCGTGACGATCATATCAATGTTGTCAATCGATTGTTGGCAAAAGGCATTAAACCTGTACTAATGAGCACTCAAGCTGAATTTGAGAATTACAAACGATTTGGTTCGAAGATTAATGCGATCGCTGACAACATCAAGAAGGATTTAGCGTCCGAATTAGGAATACCATTTATTGATTATAACGCAGGCACAAGTAATATTTTGAACCATTCAGAATACAAGCTCAAGGATTTAATTCCTGATATGTGCCACTTTGGAGATCTTGGCCATCAAAAAGGAGCAGAATTCTTAGCTAGTCAATTGATACATCAAACGGTATTTGTTTCGGGGATTAGTAAAATTGGGTATCAAAATAACAAAGTGGCATCTGATTTGAATTATTCAGATTATTTGACTGATGACCAAAAAGATGTGAAGTGGATTACTAGAACTGACGGTTTCGATTTGGAAGGTCAACTAAATTCTACTCAAACAAAGACTATGTTTGAGGTTTCGGTTTATGTTGAACGTCCGTCAATTGTCCACTATTTTGGAGACAATGTGATTTTGACATCAAATGGACAGTCGCTATCAGACGGCACTATTCTTGATGTCGGATTTTATCGAATTACAGCTAAGAATCGTCCTGGAGTTGTTAGCAAATTCCGTGGCTTGAAATTTAATTTGAAGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
13315892e932edc5d73281219b2e8f979e7e18cd0956220774c6900a1227dc5e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank