Protein

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Genbank accession
YP_010658936.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAVGDDDEYEDDPCSQYTFTFYVPDSVDPVYVQELILMPPPNNLPWDEEAMNKITQAVVDARNARDDAEESADRAEEKAGVATAQADRSKAEADRATTQATNAANSATAAANSATQANTQANRAKTEADRSKSEADRARDLADAVAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGSVMRLTKTDGSGSRAFVRQAVSFPDSHWIVYMRVKTQTGTAAQNRSAQIRFIAADNKDCVVYFNVNANGSVEPNTIHMQGTEGGTRNAATMFTGLGTEDWLDLAVKYDAVNRHIELFRRMPNGIWQKGGGRLMVDAIKPAFIEVSSMPVAPQNWWLDLDYISVCKPNLICYGDSIAAGQNEYGVTRGNNPYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFMHASTNDVNDATMTMAKRTSDTQAIIDQLHAVGAQVVLFNSMQGTQAYNDASSTTVKLRDYTDQWWNAELPKVNGLAQTLDIARLIAKDGYMDPALGASDGLHLTSASAQKIADKLGQFFSNSSDTNGFASLDSPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLSMRNRTGSQMEAGGVRSGYYYVPGDSSNPLPGNVYAFVHHMSYDTNKGWELWNHCYTDRVYMRHSNNAGVWQTPVELVTEKWMERNSFMTPRVTAFNRLPVASSAGFEGVVPLQTNSSGAWRNVNAGVAGLGLLGATTAGNALNYIGGMPKAPTNDRANSNLNNLPDECGFYGLGPAPYSNIPPGVDAINPVGSAVYHQVYDANTATQIFIPRTSDICYFRRKAGGTWSPWVRYLTDLQLVGTTTNSSAGVPNGAIMQINGSAAVNVGVALRFADGTQIVRALLQLDYGAVDLLQCQFTFPMAFVSKPVVTATLEQSTVADINNMPLQALGPVMVASIYAGNCNVRVMRSQGYTAGGFAAGSKMLCSVIAMGFWK
Physico‐chemical
properties
protein length:1051 AA
molecular weight: 114192,23820 Da
isoelectric point:5,17698
aromaticity:0,09324
hydropathy:-0,30714

Domains

Domains [InterPro]
DC_0123
ATT
1–152
DC_0123 IPR051532 cd19958
DC_0849
ATT
112–345
DC_0849 DC_0711
Coil
Unmapped
118–159
Coil Coil IPR036514
SSF52266
STR
418–616
SSF52266
cd00229
ENZ
421–617
cd00229
IPR013830
ENZ
423–606
IPR013830
YP_010658936.1
1 1051
Architecture
ATT
STR
ATT 1-345 | STR 369-1050 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010658936.1
1 1051
Domain Start End Length (AA) Confidence
N-terminal 1 221 221 0,9861
Central domain 222 440 220 0,4383
C-terminal 441 1051 610 0,7875
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-221
Central
222-440
C-terminal
441-1051

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage VB_PaeP_VL1
[NCBI] 		2894395 Uroviricota > Caudoviricetes > Schitoviridae > Litunavirus > Litunavirus Vl1
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010658936.1 [NCBI]
Genbank nucleotide accession
NC_070862.1 [NCBI]
CDS location
range 32405 -> 35560
strand -
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGTAGCCCACAGGCGAACGAGAAGTTCACCGTGCGACTGACCCGTCCTGGTATGAGCGATGCAGAGCACTGCGTCGTAATTCCCGAAACCTACGAGATGGTGACCGATGCCAAAGGCGAGTTCACCATGGACCTGGAATCGTCTACCTCTGCCTACCGCGTCACCGCTGTAGGCGATGACGACGAGTATGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTGCCGGACTCTGTTGATCCGGTCTACGTGCAAGAACTGATCCTGATGCCTCCGCCCAACAATCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAAGCGGTGGTCGATGCTCGTAATGCACGGGACGATGCCGAAGAGTCGGCTGACCGTGCAGAAGAGAAGGCGGGTGTCGCTACTGCGCAGGCTGATCGCTCCAAGGCGGAAGCTGACCGTGCCACTACCCAGGCTACGAACGCAGCCAATTCGGCTACTGCTGCGGCCAACTCTGCCACCCAAGCCAACACGCAAGCCAACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGCGAGGCTGATCGGGCACGGGATCTGGCTGATGCCGTGGCTGAAAAGGTCGAGGGTGGCTCGCTGCCTCCGCTGGTGGGCATGAACGAGACCTTCACCTATGAAGGTACCGACCCTTACCGCTGGACCGTCTCTGGTCCTGCTACGGCTGTCTCGGATGGAAGTGTCATGCGCCTGACCAAGACCGATGGCAGCGGTTCCCGTGCGTTCGTACGGCAGGCAGTGTCCTTCCCGGACAGCCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCTGCACAGAACCGTTCTGCTCAGATCCGGTTCATCGCTGCCGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTCGGTGGAACCTAACACCATCCACATGCAAGGCACCGAGGGTGGTACCCGCAACGCTGCCACCATGTTTACTGGTTTGGGTACCGAGGACTGGCTAGACCTCGCTGTGAAGTACGACGCAGTGAACCGCCATATTGAACTCTTCCGTCGCATGCCCAATGGCATCTGGCAGAAGGGCGGTGGACGTCTGATGGTTGACGCTATCAAGCCGGCCTTCATCGAAGTCTCGTCTATGCCTGTAGCACCGCAGAACTGGTGGCTGGATCTGGACTACATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGATAGCATTGCTGCTGGTCAGAACGAGTATGGGGTAACCCGTGGTAACAACCCCTACAACAACAACCGCAACTGGGCTGGTACCTGGTTCGGCAAGGTTCCGCTCTACGCCACCAACCGGAACAACCTGGTGCTTGTCCAGGGTGTGGAAGGCCGCCGTACCTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAATTCCGGCGTGAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAACGACGCCACCATGACGATGGCCAAGCGTACGTCGGATACCCAAGCCATCATCGACCAGCTTCACGCTGTAGGTGCACAGGTAGTGCTGTTCAACTCCATGCAGGGTACCCAGGCGTACAACGATGCCTCGTCCACTACCGTCAAGCTGCGTGACTACACCGACCAGTGGTGGAACGCCGAACTGCCCAAGGTCAATGGTTTGGCCCAGACCCTGGACATCGCACGTCTCATCGCCAAGGACGGGTACATGGACCCGGCTCTTGGTGCGAGTGACGGACTGCACCTGACCAGTGCCTCGGCACAGAAGATCGCTGACAAGCTCGGCCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTTCGTTGGATAGCCCTGCCTTCACTGGCATTCCGACTGTCCCCACGCAGACTCCTTTCCTGCCTTACGGCAAGCAGATCGCCAACACCGAGTACGTCATTACCTTCATCCAGGACTGGACAAGTAACTATGGTTACGGTGACCTGTCGATGCGCAATCGGACCGGTTCCCAAATGGAAGCCGGTGGGGTGCGTAGCGGTTATTACTATGTTCCTGGGGATTCTTCTAACCCCTTGCCGGGGAATGTTTATGCATTCGTGCACCACATGTCCTACGACACCAACAAGGGTTGGGAACTCTGGAACCACTGCTACACCGACCGCGTGTACATGCGCCACTCGAACAACGCAGGTGTATGGCAAACTCCGGTGGAATTGGTTACTGAGAAGTGGATGGAGCGTAATAGCTTCATGACCCCTCGGGTTACCGCATTCAACCGTCTGCCCGTGGCTTCTTCTGCTGGTTTTGAAGGGGTTGTTCCCTTGCAGACCAACAGTAGTGGGGCTTGGCGTAACGTGAATGCTGGTGTAGCTGGGTTGGGCCTTCTCGGTGCAACTACGGCTGGTAATGCACTGAACTACATTGGTGGTATGCCCAAAGCCCCAACCAATGATCGGGCCAACAGTAACCTCAACAATTTGCCTGATGAGTGTGGTTTCTACGGTTTGGGACCAGCACCGTATTCCAATATCCCTCCGGGGGTTGATGCGATTAACCCAGTGGGTTCTGCCGTCTACCATCAGGTTTACGACGCCAACACCGCTACGCAAATTTTCATTCCGCGTACTTCGGACATCTGCTATTTCCGCCGTAAGGCAGGGGGAACCTGGAGTCCATGGGTTCGTTACCTGACTGATTTGCAGCTGGTAGGCACCACTACTAACAGCAGTGCCGGTGTTCCGAATGGTGCCATCATGCAGATCAATGGGAGTGCTGCTGTAAACGTAGGTGTTGCCCTCCGCTTTGCAGACGGTACTCAAATTGTTCGGGCGTTACTCCAATTGGATTACGGTGCAGTAGATCTCCTTCAGTGTCAGTTCACTTTCCCCATGGCTTTTGTGAGTAAGCCGGTGGTAACCGCCACCCTGGAACAAAGTACTGTTGCTGACATCAACAACATGCCTTTGCAGGCTCTTGGCCCTGTTATGGTTGCCAGTATCTATGCAGGCAACTGCAACGTGCGTGTCATGCGGTCTCAGGGGTATACTGCTGGTGGATTCGCAGCAGGCTCTAAAATGCTGTGCTCTGTCATCGCAATGGGGTTCTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a133959c4b976c8cb1167c57710488a6dce48d652733b253e65726d2e67740ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6609
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50