Protein

View in Explore
Genbank accession
UJD04935.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFSQPGGSVSKDVNKQSIARTLGVKTSEVAYLKVGVSIAGVKTLFDSSSQLAFRNVNSTGNVVSWSVQNNVLTLVTTTGNSTLYLSRIWDRQVIQFEDFGGFTSSVVDQTPFINLASECARSTGLEIFCRGSYYVTGVVNLSGVKAGGFTLLGPTTSTSQQILLTQSSQLSHFTLDKVYIRHTGGDIELTDFLIKNTRSTAAVISTNLTALGDLSIKRGAFTGCYYGILRQGDPDTSAALRSVYLQNLRFTDMQADCIELNLGINDINTVIDNIYIDTVNHTGTNAFWGIAIGIAGKGNYTLTDNPSLLYKNLSISNCYIYKARQCLHLEKCSGAHIRNIEMYPDSSMSPNTGLDTAGLVIYGSMNTVISGITGNPLTDDAKMIWQTWGVVSGGYISAGRNLSISEVNIKGTIQLEMSATNTFLASLKLNNVTATTISLYGHMSFLGLTNVESEFLNIDIHRILGNGKDNTRRLNKCVASFNRVKCFNMNLNANGLMLGNIAFDQLEVTDCNFQIEKTTNTSTVLRGTPITKVDQTFYYNGTGFPIGYPFKKGDKIVDTNGVIYTVTSPGAKFKTTTATTAIAALAVGDSRVFANGSENWVSTFPKTAGVAVTIPGAGVGGADLQTRIIRSGFVSGGVYCFDIEDTVSTATSAGVLIYPTNECTFITNGVS
Physico‐chemical
properties
protein length:674 AA
molecular weight: 72442,12420 Da
isoelectric point:7,47441
aromaticity:0,08754
hydropathy:0,02745

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–91
G3DSA:3.30.2020.50 IPR011050 DC_0045
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 IPR011050
UJD04935.1
1 674
Architecture
ATT
STR
RBD
ATT 1-95 | STR 96-347 | RBD 380-672 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD04935.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,9870
Central domain 113 536 425 0,9898
C-terminal 537 674 137 0,8427
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-536
C-terminal
537-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp5
[NCBI] 		2863273 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD04935.1 [NCBI]
Genbank nucleotide accession
MZ634341.1 [NCBI]
CDS location
range 141711 -> 143735
strand +
CDS
ATGAATCCGCAATTCAGTCAGCCCGGCGGTTCCGTCTCTAAAGACGTGAACAAACAATCCATAGCCCGGACACTCGGGGTCAAAACCAGTGAAGTTGCTTATCTCAAAGTGGGCGTCAGTATCGCGGGTGTTAAAACTCTGTTTGATAGTAGTAGTCAACTGGCATTTAGAAATGTGAATTCTACTGGGAATGTCGTCTCTTGGTCTGTACAGAACAACGTATTGACTTTAGTGACCACCACTGGAAATTCCACCCTTTATCTTAGTCGGATTTGGGACCGCCAAGTTATACAGTTTGAAGATTTTGGTGGGTTTACATCATCTGTGGTGGATCAAACCCCATTTATAAATTTAGCGTCAGAATGTGCCAGATCCACCGGGCTGGAAATTTTCTGTCGAGGATCTTATTATGTTACTGGTGTTGTGAATCTTTCCGGTGTCAAAGCAGGTGGATTTACGCTGCTGGGGCCGACAACATCCACATCACAGCAAATTTTGCTGACACAGTCTTCTCAGTTGTCACACTTCACGTTAGACAAGGTGTATATCCGTCACACTGGTGGGGATATTGAATTAACAGATTTTCTTATAAAAAATACCCGATCCACCGCTGCGGTAATAAGCACGAATTTGACTGCATTAGGCGACCTTTCCATCAAACGTGGGGCTTTCACCGGGTGTTATTATGGTATATTACGACAAGGCGACCCAGACACTTCAGCAGCCTTGAGAAGTGTGTACCTACAAAACCTGAGATTCACGGACATGCAGGCTGATTGCATTGAGTTGAATTTAGGTATTAACGATATCAATACTGTTATTGACAACATCTATATCGACACAGTTAACCATACTGGGACAAATGCTTTTTGGGGAATTGCTATCGGTATCGCAGGCAAAGGGAATTATACACTTACCGATAATCCATCCCTATTATACAAAAACTTATCCATCAGCAATTGCTATATCTATAAAGCTCGCCAATGTTTGCATTTAGAAAAATGTTCTGGGGCGCACATCAGGAACATAGAAATGTACCCGGACAGTTCAATGTCTCCTAACACAGGCTTGGACACTGCTGGCCTCGTTATTTATGGCTCTATGAATACCGTCATATCCGGTATTACGGGAAATCCGTTGACAGATGACGCGAAAATGATATGGCAAACTTGGGGTGTTGTTTCAGGTGGATACATAAGTGCGGGTAGAAATCTATCTATTTCTGAAGTCAACATCAAAGGAACTATACAATTGGAAATGTCGGCCACGAATACGTTCTTGGCTTCTTTGAAACTTAACAATGTAACAGCGACGACAATCAGCCTGTATGGGCATATGTCATTCTTGGGTTTAACCAATGTTGAATCTGAATTCCTGAACATCGATATACATCGGATATTAGGGAATGGAAAGGACAACACACGTCGCTTGAACAAATGTGTTGCATCATTCAACCGAGTGAAATGCTTCAATATGAATTTGAATGCCAATGGTCTTATGTTGGGTAATATAGCATTCGATCAATTAGAAGTCACGGATTGTAATTTCCAGATTGAAAAAACCACGAATACTTCTACTGTTCTCAGAGGTACTCCGATAACAAAAGTGGATCAGACTTTCTATTATAACGGCACTGGTTTCCCGATTGGTTATCCATTTAAGAAAGGTGATAAAATTGTGGATACCAACGGTGTGATTTATACAGTTACTTCCCCTGGTGCCAAATTTAAAACTACCACAGCAACCACCGCTATCGCGGCTTTAGCTGTTGGAGATAGTCGGGTGTTTGCTAACGGTTCCGAGAACTGGGTTTCCACCTTCCCGAAAACGGCTGGTGTTGCTGTCACTATACCTGGGGCTGGTGTTGGTGGGGCCGACCTGCAAACACGAATAATTCGTTCAGGGTTTGTTTCTGGTGGTGTGTATTGCTTTGACATCGAAGACACGGTTTCCACAGCAACATCGGCTGGGGTTTTAATTTATCCTACCAATGAATGCACCTTTATCACTAATGGAGTTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0017308b5eb8a2eb4ec3fb6610ccd8fdfe67b21f6682930a7ea9cde34efc711
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank