Protein

View in Explore
UniProt accession
A0A8S5ULP4 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MSKVRHAVEWLKRDKLLKALSVAMIFSLAFSGYTLFKSLTLQPGQSVTISGGAKVEKPVTSITNAQVDKNGNLVVYYSDGEARNVGSVIGTSGKDGADGRAPTATEIAVAVKAYCITNKCSESPTSAQVAAAVASYCASGNCKGNDGKNASDEQVAAAVARYCANGKCKGETGATGATGATGATGLSGVNGANGADGQSPVLACVDTKDNSGNQTSWIAWKYPSEQNGAYRRLYKIDHQPNCITI
Physico‐chemical
properties
protein length:245 AA
molecular weight: 25257,01360 Da
isoelectric point:8,83928
aromaticity:0,06122
hydropathy:-0,23347

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage sp. ctOz71
[NCBI] 		2825793 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF95340.1 [NCBI]
Genbank nucleotide accession
BK016108 [NCBI]
CDS location
range 8841 -> 9578
strand -
CDS
ATGAGCAAGGTACGACACGCCGTAGAGTGGTTGAAGAGGGATAAGCTGCTTAAAGCGCTGTCCGTGGCTATGATATTTAGCCTAGCCTTTAGTGGTTACACTCTCTTTAAAAGCCTTACACTCCAGCCTGGCCAATCTGTCACTATAAGTGGTGGTGCAAAGGTAGAAAAACCAGTAACCAGCATCACTAACGCCCAAGTAGACAAAAACGGCAATCTAGTCGTCTACTACTCCGACGGCGAAGCACGCAATGTCGGTTCGGTTATCGGAACGTCCGGTAAAGACGGGGCAGATGGTAGAGCGCCAACCGCTACAGAAATTGCTGTGGCGGTTAAAGCCTACTGTATCACCAATAAGTGTTCAGAGTCACCCACTAGCGCACAAGTAGCCGCTGCTGTAGCATCATATTGTGCAAGCGGGAATTGTAAGGGGAATGACGGTAAAAACGCCTCTGACGAGCAGGTAGCCGCAGCCGTGGCGCGGTACTGTGCGAACGGTAAGTGTAAGGGTGAGACTGGAGCTACCGGAGCGACTGGAGCGACTGGCGCGACTGGCTTGAGCGGAGTAAACGGGGCGAACGGCGCAGATGGTCAAAGCCCCGTGTTGGCTTGTGTGGACACTAAAGATAACTCTGGTAATCAAACATCATGGATTGCCTGGAAGTATCCAAGCGAGCAGAACGGCGCGTACAGGCGTTTATACAAGATTGACCACCAACCTAATTGCATAACAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf6dd35143b31424f5b4655a22899cc0fd4de0500b829789a6a6c7dcb0335c89
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50