Protein

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Genbank accession
YAB57851.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAMEWKQVFLYDGTQILLKPDMFGNYEYPKEKWTDIKPPQGIYTPFRFDGEKWIGSTKEEWEARQPKIEIPPSEEEELHLELIKTNIELKKEVAQLNEDVANLVTMLVQKQGGN
Physico‐chemical
properties
protein length:114 AA
molecular weight: 13399,14570 Da
isoelectric point:4,76717
aromaticity:0,10526
hydropathy:-0,73421

Domains

Domains [InterPro]
DC_0222
STR
1–114
DC_0222
Coil
Unmapped
79–106
Coil
YAB57851.1
1 114
Architecture
STR
STR 1-114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Cicami
[NCBI] 		3446831 Viruses >
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAB57851.1 [NCBI]
Genbank nucleotide accession
PV956268.1 [NCBI]
CDS location
range 23624 -> 23968
strand +
CDS
ATGGCTATGGAATGGAAACAAGTATTTTTGTATGACGGAACACAAATACTTTTAAAACCTGATATGTTTGGCAATTATGAATATCCTAAAGAAAAATGGACGGATATTAAACCACCGCAAGGAATTTATACACCGTTTCGTTTTGACGGGGAAAAGTGGATTGGTAGCACTAAAGAAGAATGGGAAGCAAGACAACCTAAAATAGAAATACCACCAAGCGAAGAGGAAGAACTTCATCTTGAACTTATAAAAACAAACATAGAACTAAAAAAAGAAGTTGCGCAACTCAATGAAGATGTAGCAAATCTTGTAACAATGTTAGTTCAAAAGCAAGGAGGCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
967b0ee5aa482dc42d9a9eb39b77e6007823b1b75e1ee41094fa648f070873c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequences of Staphylococcus epidermidis siphophages Cicami, Sazerac, Slasher, Southeast, Spartan, and Undine Hill,C., Akrami,A., Cichanski,S., Aslan,B. and Hatoum-Aslan,A. 1989-03 — GenBank