Protein

Genbank accession
YP_009835307.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MATLAKQSVETGNRIYIMIKNEVIGRAQSLTGDRSFGTEGVYELGSIMPHEHVFLKYTGTVTLERYRLRTGNMSDKKIAALGEDVLKIDIMDINVKDNQTGSLIICYRGCSINTYSETYRANDITGESGQFYYLTSSNLSNGGYSTSQFNTASGIS
Physico‐chemical
properties
protein length:156 AA
molecular weight: 17211,12200 Da
isoelectric point:6,10408
aromaticity:0,08974
hydropathy:-0,32051

Domains

Domains [InterPro]
IPR058640
5–137
IPR058640
YP_009835307.1
1 156
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LpeD
[NCBI] 		2041210 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835307.1 [NCBI]
Genbank nucleotide accession
NC_048677 [NCBI]
CDS location
range 15635 -> 16105
strand +
CDS
ATGGCTACACTTGCAAAACAATCAGTGGAAACTGGTAACCGGATTTATATCATGATTAAGAACGAAGTTATTGGTCGTGCACAGTCATTGACTGGTGACCGTTCATTCGGTACTGAAGGTGTTTATGAGTTAGGTTCTATTATGCCTCATGAACATGTTTTCTTAAAATATACTGGTACTGTAACTCTTGAACGGTATAGACTTAGAACTGGTAATATGTCTGATAAGAAGATTGCCGCTTTAGGTGAAGATGTTCTTAAGATTGACATTATGGATATTAACGTTAAGGATAATCAAACGGGTTCATTAATAATTTGTTATCGTGGTTGCTCAATAAACACTTATTCTGAAACTTATCGTGCAAATGATATTACTGGTGAATCGGGTCAATTCTATTACTTGACTTCAAGTAACTTATCCAATGGTGGTTACTCCACTTCTCAATTTAATACCGCTTCAGGTATTTCTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
72c9736742efb2d0ea1c1b61f9d42a812e5629a905c27719c416db8df0b3891a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6714
Evidence 0,6714
Download PDB

Literature

Title Authors Date PMID Source
Isolation and Characterization of phages of Lactobacillus pentosus and plantarum Qi,R., Yu,M., Qiao,X. and Li,Y. 2012-01-19 — GenBank