Protein

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Genbank accession
API81877.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSKLVVVRIGHNRDMTPARRLVEALRKEGATCVRVWGRLRSRLHTQIETRYDLASNTWEDELVEYPLGLALVLEVQGLSRKKLKQVLRRVGTGYWPRVRSKPSPLWRRA
Physico‐chemical
properties
protein length:109 AA
molecular weight: 12731,77260 Da
isoelectric point:11,23647
aromaticity:0,06422
hydropathy:-0,48257

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage G20c
[NCBI] 		1406341 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Thermus thermophilus
[NCBI] 		274 cellular organisms > Bacteria > Thermotogati > Deinococcota > Deinococci > Thermales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
API81877.1 [NCBI]
Genbank nucleotide accession
KX987127.1 [NCBI]
CDS location
range 38620 -> 38949
strand -
CDS
ATGAGCAAGCTCGTTGTGGTTCGAATCGGGCACAACCGGGATATGACCCCGGCTAGGAGGTTAGTGGAGGCTCTCCGCAAGGAGGGTGCGACTTGCGTGCGTGTGTGGGGGAGGTTGCGTTCTCGGCTCCACACGCAAATAGAAACCCGCTATGACTTGGCGTCCAACACTTGGGAGGACGAGTTGGTGGAGTACCCACTTGGCCTCGCCCTGGTATTGGAAGTCCAGGGCCTGTCCCGTAAGAAGTTGAAGCAAGTTCTACGCCGAGTGGGCACGGGGTATTGGCCCCGTGTCAGGTCAAAGCCCTCTCCGCTTTGGAGGCGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ffe0c90b876f3bbe58e91bc5d666a5ba5d8589af13f57e29523d2cede0be3c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism Xu,R.G., Jenkins,H.T., Chechik,M., Blagova,E.V., Lopatina,A., Klimuk,E., Minakhin,L., Severinov,K., Greive,S.J. and Antson,A.A. 2017 28100693 GenBank