Protein

View in Explore
Genbank accession
XZF39129.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLDKLNQPKGSTIGVLRDGRTIQQAIDDTVALPHVSPMWQKVRSAMDDVYIVIMGDSTGNETFEWVYQWATHLSQTVKTHSIRYRLWVDGSGWQGEERMSTGTTERSIFIDNVSVPGSTERYFQGSATSNIFNSGRVYDLVLLNYGHNEGTSVPSITISAGFTEAIFACRQINPMAPIIVTAQNPRRDFPDHSARAVACWADIAGVNGLGVIDVYSAFIKLGSPSGLYIDMIHPNADGHKVWLEVVKKALSDTPSYQFDKVAEPYSGPLRLNLIPNPAFVTWGVDVPALWEANAVSVTQDLARRESFAYSVKVTCTDVNSPLLYVDLSDTLIASRGQWVTFAARVWRPSGISTNAGRLQISGSGMNTVTSRSKANEAENGWMWAVCHAFVPKGTTSLQARFLGGTVVGDSFNVDRVWFGIGKVPSDIDFMGQPAVTLADYYQAENVGVPVGYDTQVSVDGKHIVATPVTSKARFFININHLTPGQTYRVTWSKASPADGYAYARSSGGGLGAVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINPLDVTIASIVKV
Physico‐chemical
properties
protein length:556 AA
molecular weight: 60366,41520 Da
isoelectric point:6,07907
aromaticity:0,09712
hydropathy:-0,06223

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0332 DC_0332
IPR036514
STR
34–255
IPR036514
SSF52266
STR
43–251
SSF52266
cd00229
ENZ
84–249
cd00229
XZF39129.1
1 556
Architecture
ATT
STR
ATT 1-40 | STR 41-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZF39129.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 78 78 0,3860
Central domain 79 277 200 0,1717
C-terminal 278 556 278 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-78
Central
79-277
C-terminal
278-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RCIP0226
[NCBI] 		3448824 Viruses > unclassified bacterial viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZF39129.1 [NCBI]
Genbank nucleotide accession
PV854179.1 [NCBI]
CDS location
range 37924 -> 39594
strand +
CDS
ATGTTAGACAAATTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTATCCAACAGGCCATTGATGATACAGTGGCCCTACCCCATGTTTCCCCGATGTGGCAGAAGGTTCGCAGCGCAATGGATGATGTGTATATTGTCATCATGGGCGACTCTACAGGGAACGAGACGTTCGAGTGGGTGTACCAGTGGGCCACGCACCTTTCGCAGACAGTCAAGACCCACTCCATCCGGTATCGCTTATGGGTAGATGGCTCAGGGTGGCAGGGAGAGGAGCGGATGAGTACGGGCACCACCGAGAGGTCTATCTTCATCGATAACGTTTCTGTTCCGGGCAGCACTGAGCGTTACTTCCAAGGGTCAGCTACCAGTAACATCTTCAACTCGGGCCGTGTGTATGATTTGGTTCTCCTCAACTACGGGCACAACGAAGGGACCAGCGTTCCGTCCATAACCATTAGCGCCGGGTTCACCGAAGCAATCTTCGCTTGTCGCCAGATTAACCCGATGGCTCCTATAATCGTCACAGCACAGAACCCTCGACGGGACTTCCCTGACCACTCTGCCCGCGCGGTGGCTTGTTGGGCCGATATAGCTGGTGTAAATGGGCTTGGTGTTATTGACGTATACTCTGCGTTCATCAAACTTGGCTCACCGTCTGGACTCTACATCGATATGATTCACCCTAACGCCGATGGTCACAAGGTATGGCTGGAAGTTGTGAAGAAGGCTCTCAGCGATACCCCATCCTACCAGTTCGATAAAGTTGCAGAACCCTACAGTGGACCGCTCCGTCTGAACCTAATCCCGAACCCAGCGTTTGTAACATGGGGTGTTGACGTTCCGGCGCTGTGGGAAGCCAACGCAGTGAGTGTAACTCAGGACCTCGCCCGCCGTGAGAGCTTTGCATACTCGGTAAAGGTAACTTGTACCGACGTAAACAGTCCGCTTCTATACGTTGACCTATCTGACACCTTGATCGCCTCTCGTGGCCAGTGGGTAACATTCGCTGCCCGAGTGTGGAGACCTTCTGGCATCTCAACGAATGCTGGTCGCCTTCAAATTAGTGGCAGTGGGATGAATACCGTAACGTCTCGCAGTAAGGCTAACGAAGCGGAGAACGGTTGGATGTGGGCAGTGTGCCATGCGTTTGTACCAAAAGGGACCACATCCCTACAGGCTCGCTTCTTGGGTGGTACTGTTGTGGGTGATTCCTTCAACGTCGACCGTGTGTGGTTCGGTATTGGTAAGGTTCCTAGCGACATCGACTTCATGGGACAACCAGCAGTAACTCTGGCTGATTACTACCAAGCCGAGAACGTGGGCGTTCCTGTAGGTTATGACACTCAGGTATCCGTGGATGGGAAACATATTGTGGCAACCCCAGTTACCTCCAAGGCCAGATTCTTCATTAACATTAACCACCTGACTCCGGGCCAGACCTACAGGGTCACTTGGTCCAAAGCGTCCCCGGCTGATGGGTATGCTTACGCCCGGTCGTCTGGGGGTGGCCTTGGTGCGGTTCTGGATACTGTTCGTCTATCTGCTGGGACCACGAGTACGTTTGTGGCACCCTCGAAGACCTGCTCGTTCGTTATGGAGTCTGATGGTATAAACCCGCTCGATGTAACCATTGCGTCCATCGTCAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0f4a09d2054802f1a5acd9419f808dac86b7f4118c0d4a63f6c60b98088ce19
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50