Protein

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Genbank accession
QMP81465.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSVPNQIPESNYVGNGTTTTFAANFEYASDSDVFVTVNGVAPEIGQAVFANGVFTFITAPANGTAVRVYRSTPIERDTEYDNHDNVFRPRVVNIDFDRVWFVLQEYLLSLGITNARITQEIADRIQADAEMMNYILNEDNELKADYILRDENLKTDYIYRDENLKKYVDQTLGALLNLPDFQGIEAQFVKDVSGKNQQEINNALAGVGEKVKREFVSVWDFFTTSEYATYKASPTAFDASRPVQEFFNYIVANDTRVAYCSGDFVTSQDLLLGSGSAKTKLLFGNASFKALNAIDTVLNINAGSDFEWVGMITTTGTGSTGSNSYNSRTCRVGVQISSPGKASPRNKYTAITANNFKEFGVFANGVASLSSLGFIRSSNCGSGKKTAGYSLTSNFSNATNSGSSGSVSQLTTLDVDTLPSSDLASANTNTLPLQAIINGTPYYIQSIDRVNNKITIFPWIEPSITSGTLTYMFGGAVCVNGRDSSVLGIEMIDAVNCGAALVSGALYPPVVERIVSQVNGAALVLGQNPASAMIGGSVGTLYCENNDFDLIRVTRSKLSFNILNTVAFNMNKVGFACATRSTSGSYSAFAHLKGINIFENGVPVQYQRSSASLPSQATCDVTDPNNSDFIFNGGATASTITLGTPNDNYANLFGIYKKRVIVYGTGPNNRPSTVNFTVADTANYTINAAGTTTTSYSGFDGFAVFDIIYRSDTKRFLISQVSNRDRAASVTYNPPSLTASGTAGDFVSTTVNLTGATVGTPVHAAFTQYNADIEISAQVSAENTVTVKFKNTSAAAVDLSSGTLTVKLI
Physico‐chemical
properties
protein length:809 AA
molecular weight: 86731,51260 Da
isoelectric point:4,95814
aromaticity:0,10012
hydropathy:-0,08504

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMP81465.1
1 809
Domain Start End Length (AA) Confidence
N-terminal 1 239 239 0,9856
Central domain 240 623 385 0,9694
C-terminal 624 809 185 0,9681
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-239
Central
240-623
C-terminal
624-809

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_APEC
[NCBI] 		2759186 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli APEC O78
[NCBI] 		1274814 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP81465.1 [NCBI]
Genbank nucleotide accession
MT664721.1 [NCBI]
CDS location
range 10358 -> 12787
strand +
CDS
ATGTCAGTACCAAATCAGATACCTGAAAGTAATTATGTAGGTAACGGCACGACAACAACATTTGCTGCTAATTTTGAATATGCAAGTGATTCAGATGTGTTTGTTACTGTAAATGGAGTTGCACCAGAAATCGGACAGGCCGTCTTTGCTAATGGTGTATTTACTTTTATTACAGCCCCAGCAAACGGTACAGCAGTTCGCGTATATCGCAGCACACCAATTGAACGAGACACGGAATACGATAACCACGACAATGTATTTCGTCCAAGAGTGGTTAATATTGACTTTGATCGTGTCTGGTTTGTGCTTCAAGAGTACCTATTATCGCTGGGCATTACCAACGCTAGGATTACACAGGAAATAGCAGACCGCATTCAAGCCGATGCAGAAATGATGAACTACATTCTGAATGAGGATAATGAACTAAAGGCCGACTATATCCTTCGTGATGAAAACCTTAAAACGGATTATATATACAGGGATGAGAACCTGAAAAAATATGTTGATCAAACATTGGGCGCTCTACTTAATCTTCCAGACTTTCAGGGAATTGAGGCACAATTTGTTAAAGATGTAAGCGGAAAGAACCAGCAAGAGATTAATAACGCTCTTGCTGGTGTTGGTGAAAAAGTCAAAAGAGAGTTTGTTTCAGTGTGGGATTTCTTTACAACCTCTGAGTATGCAACGTACAAAGCATCCCCAACAGCATTTGACGCAAGCAGACCCGTTCAAGAATTTTTCAATTATATTGTTGCAAACGATACTCGTGTTGCCTACTGTTCAGGTGATTTTGTAACAAGTCAAGACCTTTTGCTTGGTTCTGGCTCAGCAAAAACAAAGCTGTTGTTCGGGAATGCTTCATTCAAAGCACTTAATGCTATTGATACGGTACTCAATATTAATGCCGGCTCTGATTTTGAGTGGGTTGGAATGATTACAACAACAGGAACAGGAAGCACTGGGTCTAATTCTTATAATTCCCGAACTTGTCGAGTTGGCGTGCAAATAAGCTCACCTGGCAAAGCCTCACCACGGAACAAGTACACAGCAATCACAGCAAACAATTTCAAAGAATTTGGGGTTTTTGCTAATGGCGTTGCTTCTCTTTCTTCCCTTGGATTCATCAGATCAAGTAATTGCGGTTCTGGCAAAAAAACAGCAGGCTACAGCCTTACTTCAAATTTCTCTAATGCAACAAATAGCGGCAGTTCTGGCTCAGTAAGTCAATTAACAACACTTGATGTTGATACTCTACCATCATCAGATTTAGCATCAGCTAACACAAACACACTACCCCTGCAAGCTATTATCAACGGCACGCCGTACTACATTCAGTCTATAGATCGAGTTAATAACAAGATCACCATATTCCCGTGGATTGAGCCATCAATAACATCGGGAACCTTAACTTACATGTTCGGGGGTGCTGTTTGTGTTAATGGCAGGGATTCCTCTGTACTCGGAATTGAAATGATTGATGCGGTTAACTGCGGTGCTGCTTTAGTCTCCGGTGCATTATACCCCCCTGTTGTTGAGCGTATTGTTTCTCAAGTAAACGGTGCTGCGTTAGTGTTAGGTCAAAACCCTGCCTCTGCAATGATCGGTGGTTCTGTTGGTACTCTATATTGTGAAAACAATGACTTTGATTTAATTCGTGTTACTCGTTCAAAATTAAGTTTCAACATTCTTAACACTGTTGCATTTAACATGAACAAAGTCGGCTTTGCTTGTGCGACACGCTCAACATCCGGCTCATACAGTGCTTTTGCGCATTTAAAAGGAATTAATATTTTTGAAAACGGTGTTCCTGTTCAATACCAGAGAAGCTCTGCTAGTCTTCCCTCACAAGCAACATGTGATGTGACCGACCCAAACAATAGTGATTTTATTTTCAATGGTGGTGCAACGGCTTCAACAATTACTTTAGGCACTCCAAACGATAACTATGCAAACCTATTTGGTATTTATAAAAAGCGCGTTATTGTCTACGGAACAGGTCCGAACAACAGGCCTTCAACTGTAAACTTCACCGTTGCTGACACTGCAAACTACACGATCAATGCAGCAGGTACAACAACCACATCATATAGCGGATTTGATGGTTTTGCTGTATTCGATATTATTTATCGAAGTGACACAAAACGCTTTTTAATATCACAAGTCAGCAATCGAGATAGGGCGGCGTCTGTAACATATAATCCGCCATCACTAACAGCATCAGGCACAGCAGGGGATTTTGTTTCAACGACAGTGAACTTAACTGGTGCAACTGTTGGAACGCCAGTTCACGCCGCTTTCACTCAATACAATGCTGATATTGAAATTAGTGCGCAAGTAAGTGCAGAAAATACTGTCACAGTTAAGTTCAAAAATACTTCTGCTGCTGCTGTTGATTTATCAAGTGGAACACTAACAGTAAAACTAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05fb5b002d1545e6ecee9f2025d38ca44286c22a14ccd032480de4b6efa55cb3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7474
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Activity Analysis of Broad-Spectrum Endolysin from a Novel Phage Infecting Turkey Pathogenic Escherichia coli APEC O78 Deng,S.S. 2021-05-31 — GenBank