Protein

View in Explore
Genbank accession
AXY83367.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTISQGDIKIVASQVMDDVDEGGGAPTSVEIRDGVSNDIFTDISEADRAVGRINLRKINVSVQTPDRDRYLGANVIVAEPPNDPNVSITIFKAGTPFDRRTDAQDTLESYSIKGPVWGGYLLENHVAGMRSVQLFQRPGNALPTINRTLVLVQNEGLPSEVEQYVRVTKVESEVRTFTEIVNGEAVNFLGEVVTLSLSDRLRHDFNGSPASRSYAPQAGKALVRDTVVADAGVYSGVVPLQVASEIGDVEVKATSVYTQLVPSARTETSILDQRPASERTLTLATTPRNVTVGVAPHTYRIRIGQENRGYDFVQILQPFPAPNTVVIAFRALGNWYTATDDGAGKLVGSAVGTVNYANGSIAVTLSAMPDIGTSIIFSWGEASGFVNRSNSGAQVRPPEYAFVLDHTAGIVPGSVEITWLSAGALKTAVAGTNGRITGDATGEVQHALGRVILRPTAMIDAGGEFNIAYEQSNTVTKEISSVSVDDGGFATLALDTVPMPGSVSVRWITVRSVSNSSGATADGSAANKTSSGNETYNTSFMFPQVPVVSGGGGNVIPPAPPVEVPRTPTAVSNPSAPVTDATAKPPMMAPGGYPPEVTEDTGPYVFVAAPAVLDPTTGAWAYNYPKADSDGNLPVWTQAEYAAGQKTINGVLYTRWGQHLA
Physico‐chemical
properties
protein length:661 AA
molecular weight: 69769,13450 Da
isoelectric point:4,86510
aromaticity:0,06959
hydropathy:-0,11362

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acidovorax phage ACPWH
[NCBI] 		2301642 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acidovorax citrulli
[NCBI] 		80869 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY83367.1 [NCBI]
Genbank nucleotide accession
MH727593 [NCBI]
CDS location
range 27794 -> 29779
strand -
CDS
ATGACGATCTCTCAAGGCGACATCAAAATCGTTGCGTCCCAAGTCATGGACGACGTGGATGAGGGCGGCGGTGCGCCGACCTCGGTGGAAATCCGGGACGGCGTCAGCAACGACATCTTCACCGACATCTCCGAGGCTGACCGGGCCGTGGGCCGCATCAACCTGCGCAAGATCAATGTGTCGGTCCAGACGCCTGATCGCGACCGCTACCTCGGCGCGAACGTCATCGTCGCAGAGCCGCCCAACGACCCGAACGTCAGCATCACCATCTTCAAGGCCGGCACGCCGTTCGACCGTCGAACCGACGCGCAGGACACGCTGGAGTCGTACTCCATCAAGGGCCCAGTGTGGGGCGGCTACCTGCTGGAGAACCACGTCGCCGGCATGCGCTCGGTGCAGCTTTTCCAGCGCCCGGGCAACGCACTGCCCACCATCAACCGCACGCTGGTGCTGGTGCAGAACGAGGGCCTGCCCTCCGAGGTCGAGCAATACGTGCGCGTCACCAAGGTGGAGAGCGAGGTGCGCACGTTCACCGAGATCGTCAACGGCGAGGCGGTGAACTTCCTGGGAGAAGTGGTCACCCTGTCGCTGTCGGATCGGCTACGTCACGACTTCAACGGTTCCCCTGCATCGCGCAGTTACGCTCCGCAGGCCGGCAAGGCGCTGGTCCGCGACACCGTGGTGGCGGACGCGGGTGTGTACTCGGGCGTGGTACCTCTGCAGGTGGCCAGCGAGATCGGAGATGTTGAGGTCAAGGCGACGAGCGTCTACACCCAACTCGTGCCCAGCGCGCGCACCGAGACCTCCATCCTCGACCAGCGGCCCGCCTCCGAACGCACGCTGACGCTGGCCACCACGCCGCGCAACGTGACTGTCGGCGTGGCGCCGCACACGTACCGCATCCGCATCGGGCAGGAGAATCGCGGCTACGACTTCGTGCAGATTCTGCAGCCGTTCCCCGCACCGAACACGGTGGTCATCGCCTTCCGCGCACTGGGCAACTGGTACACGGCCACGGACGACGGTGCCGGAAAACTCGTGGGCTCCGCCGTCGGCACGGTGAACTACGCGAACGGCTCGATTGCAGTCACGCTGTCGGCCATGCCGGACATTGGCACCAGCATCATCTTCTCGTGGGGCGAGGCCAGCGGCTTCGTCAACCGCAGCAACTCCGGCGCCCAGGTGAGACCCCCTGAGTACGCCTTCGTTCTGGACCACACCGCAGGCATCGTGCCGGGCAGTGTCGAGATCACCTGGCTGTCGGCCGGCGCCCTCAAGACCGCGGTGGCGGGGACCAACGGCCGGATCACGGGCGACGCGACAGGTGAAGTGCAGCACGCGCTGGGTCGCGTGATCCTGCGGCCGACGGCCATGATCGACGCTGGCGGTGAGTTCAACATTGCGTACGAACAGTCCAACACCGTGACGAAGGAAATCTCCAGCGTCAGCGTGGACGACGGCGGCTTCGCGACCCTCGCGCTCGACACGGTGCCCATGCCGGGTTCGGTCAGCGTGCGGTGGATCACCGTGCGATCCGTGAGCAACAGTTCAGGGGCCACGGCGGATGGCAGCGCGGCCAACAAGACCAGTTCGGGCAACGAGACCTACAACACGAGCTTCATGTTCCCGCAAGTCCCGGTAGTGAGTGGGGGCGGTGGCAACGTCATCCCACCCGCTCCACCAGTGGAGGTGCCTCGCACACCAACCGCTGTGTCGAATCCCAGCGCGCCAGTAACGGACGCGACGGCGAAGCCGCCGATGATGGCGCCGGGCGGCTACCCGCCTGAAGTGACCGAGGACACAGGCCCGTATGTGTTTGTCGCAGCCCCTGCCGTGCTGGACCCGACCACGGGCGCGTGGGCCTACAACTACCCGAAGGCGGACTCCGACGGCAACCTGCCGGTGTGGACGCAAGCCGAATATGCCGCGGGCCAAAAAACGATCAACGGCGTGCTCTACACCCGCTGGGGCCAACACCTCGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
65e0b79eda0fa3a4ebc8f898b6bf09b8b6f47e714b5233bcd7d6bc0dad93e164
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a wide host range bacteriophage infecting Acidovorax citrulli and application of phage as a biocontrol of bacterial fruit blotch Rahimi-Midani,A., Kim,J.-O. and Choi,T.-J. 2020-06-03 — GenBank