Protein

View in Explore
Genbank accession
QIG67388.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGILAEQIAQQKEAQVPQGIVTVTPSDTVPLTKAIRGFMVTVAGDVSAVFADGTSGVMPGCTPGIQYMGKITRINLTGTAATGIKGFV
Physico‐chemical
properties
protein length:88 AA
molecular weight: 8981,37650 Da
isoelectric point:7,89965
aromaticity:0,04545
hydropathy:0,37841

Domains

Domains [InterPro]
DC_2205
STR
8–87
DC_2205
IPR061180
Unmapped
17–88
IPR061180
QIG67388.1
1 88
Architecture
STR
STR 8-87 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_9
[NCBI] 		2509558 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67388.1 [NCBI]
Genbank nucleotide accession
MN988470.1 [NCBI]
CDS location
range 37876 -> 38142
strand -
CDS
ATGGGTATTCTTGCCGAACAGATCGCACAGCAAAAAGAAGCACAGGTTCCGCAAGGCATCGTGACCGTCACGCCGTCCGATACGGTGCCGCTGACCAAGGCGATTCGCGGCTTCATGGTCACAGTTGCCGGCGACGTCTCGGCGGTCTTTGCTGACGGGACTTCCGGTGTGATGCCGGGTTGCACTCCGGGCATTCAGTACATGGGCAAAATCACCCGAATCAATCTGACCGGGACGGCTGCGACAGGTATCAAGGGATTCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d11e90c6039cdf9bd0a13e2d2b33347f5e61a836d2bb1e0fdca278e2ddf4947a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank