Protein

Genbank accession
AUR92436.1 [GenBank]
Protein name
pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MADCSSYPTKSTAQTFKLDAETVNEVVTSSDDRTNPASDGLTKKTLAGIENDASNQLADIQQRADDQYSDINNQYILRNKGDYSTDPLLEFYYEFADFNGLIYFPIVAPYQVDSATYPDPSNDPNLKLGQATDDSLITSTGSTIPRRLDDRFADVVNVKDFGAVGDGVTDDTLAIQFALDSLPELGGLYFPSGDYMVSTMLTCDTNGVMIYGDGRYQSQILPHTTWDGSDALMKLGSGSTWGVKVRDLTFAVTFDELGDDSDGLIIHPWYNFDILNCGFRGGNFVTRETGGLRIMGNALHTRVDTCQLHNGYCYGMIIEGHLNGLHITNCAFDETSVSILSTGNIVELNITGNEFGSAWKNNEYPTPIELINIDLRQGVHASVLIVGNVFEGGVFTEYHARWGEVSSMTINGNSFRSASRYSLVSDSVARPLVIANNTFQSNGADGVTTDPSQGLRDPDTTTFCSDIYINSAFQQPLCISSNVSNISDRPIMWIEGTGNAIASSYANIIGNASKSAGDIAYIHGKYIGKADYVLSGVITTNSIDSYVVSGRTVAAGATEFGNITIEGLVQSGVIDYSNSQTPSGTIFVVEYLSSGFARWKLSNFTDSPISVSDITVNYALR
Physico‐chemical
properties
protein length:621 AA
molecular weight: 67286,60300 Da
isoelectric point:4,35821
aromaticity:0,09823
hydropathy:-0,17279

Domains

Domains [InterPro]
IPR012334
135–619
IPR012334
IPR011050
153–448
IPR011050
IPR024535
156–224
IPR024535
AUR92436.1
1 621
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.172.O._10N.261.52.F5
[NCBI] 		1881214 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92436.1 [NCBI]
Genbank nucleotide accession
MG592539 [NCBI]
CDS location
range 16525 -> 18390
strand +
CDS
ATGGCTGATTGTAGTTCATATCCAACCAAATCAACGGCGCAAACATTTAAGTTAGATGCTGAAACAGTAAACGAGGTTGTTACTTCTAGTGATGATCGCACAAATCCTGCTAGTGACGGGTTAACTAAAAAGACGCTTGCGGGTATCGAGAATGATGCATCAAATCAACTTGCAGATATTCAACAGCGAGCGGATGATCAGTATTCAGACATCAACAATCAGTATATTCTGCGCAACAAAGGCGATTACTCAACAGACCCGCTACTAGAGTTTTACTATGAGTTTGCTGATTTCAATGGGCTGATTTACTTCCCTATCGTTGCCCCGTATCAAGTTGATAGCGCTACATATCCAGACCCATCAAACGACCCTAACTTAAAGCTAGGTCAAGCCACAGATGATAGCCTAATCACATCAACAGGAAGCACTATCCCAAGGAGATTAGATGATCGTTTTGCTGATGTTGTTAACGTTAAGGATTTTGGGGCCGTTGGGGATGGGGTTACAGATGACACTCTGGCAATTCAATTCGCCCTAGACTCACTGCCAGAACTCGGTGGTTTGTACTTCCCTAGTGGGGATTACATGGTATCTACAATGCTTACCTGTGATACCAATGGGGTTATGATATATGGTGACGGGAGATATCAGTCTCAAATACTTCCACACACAACATGGGATGGAAGTGACGCACTAATGAAGCTTGGTAGTGGTTCAACATGGGGCGTAAAGGTTAGAGATTTAACTTTTGCTGTTACTTTTGATGAGCTTGGTGATGACTCGGACGGGTTGATTATTCACCCGTGGTATAATTTCGATATTCTTAATTGCGGGTTTCGTGGCGGTAATTTTGTAACAAGAGAGACTGGCGGCCTGAGAATAATGGGGAACGCACTGCATACTAGGGTTGATACATGCCAACTTCATAATGGTTACTGCTATGGAATGATTATTGAGGGTCATTTAAACGGATTGCATATTACAAACTGTGCATTTGATGAGACTTCTGTATCAATACTCAGCACAGGCAATATCGTAGAACTTAATATAACAGGCAATGAGTTTGGGTCTGCGTGGAAGAACAACGAATACCCAACGCCAATAGAGCTTATCAATATTGATTTAAGGCAAGGCGTTCACGCCTCCGTTTTAATTGTGGGTAATGTTTTTGAGGGAGGGGTGTTTACTGAGTATCACGCCAGATGGGGAGAGGTCTCTTCAATGACAATCAATGGAAACTCATTTAGGAGCGCATCAAGATATAGCTTGGTTTCGGACTCTGTAGCGAGACCTCTAGTTATAGCCAACAACACATTCCAAAGCAACGGAGCTGATGGCGTAACAACTGATCCATCTCAAGGATTGAGAGATCCTGACACCACAACGTTCTGCTCTGATATTTACATAAATTCCGCATTTCAACAACCCTTGTGCATCTCTAGCAATGTATCTAACATCTCAGACAGACCTATCATGTGGATAGAGGGAACAGGCAACGCAATCGCATCTAGTTACGCGAACATAATTGGGAATGCATCAAAAAGCGCTGGTGATATCGCATACATACACGGAAAGTATATTGGTAAAGCTGACTATGTATTAAGTGGAGTCATAACCACTAATTCTATAGATTCATATGTGGTTTCAGGAAGGACAGTAGCCGCTGGCGCGACTGAGTTCGGGAATATAACGATTGAAGGTCTCGTGCAATCTGGAGTTATAGATTACTCAAACTCACAGACTCCAAGTGGCACTATATTTGTCGTTGAATATTTGAGTTCAGGATTTGCCAGGTGGAAGCTTTCAAACTTTACAGACTCACCGATATCAGTAAGTGATATTACTGTAAACTATGCTTTAAGATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ce3a38beb04b7107755d53a76aa22aa05fd724930eec502986d0c8cde7926f75
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8110
Evidence 0,8110
Download PDB

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank