Protein

View in Explore
Genbank accession
YP_717705.1 [GenBank]
Protein name
tail fiber assembly
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSTLKVAAIKDLSNAVGFTFSSGSVAANQTLIVNDITINGTISGNSNSYLPSQSGNSGKVLYTDGTTAYWGTSPSTENISSMQVFTSSSTWNKPSGVKYIKVQVCGGGGGGSGHGESGGAGGYSEKIINVQSISSVTVTVAGEVNGTYYRGGASNGNGSSFGSYCSASGGYGANRNNQHSGGLGGVGSGGDLNIYGGGGQSHHNYSSVGGSSFFGGGVAAGHPQGGNFSHNHQTHSPPGSGGSGGYFHNHRGSNGRPGIVIVTHFK
Physico‐chemical
properties
protein length:266 AA
molecular weight: 26463,16030 Da
isoelectric point:9,03848
aromaticity:0,08647
hydropathy:-0,36353

Domains

Domains [InterPro]
DC_0345
STR
3–266
DC_0345
IPR049304
STR
87–263
IPR049304
YP_717705.1
1 266
Architecture
STR
STR 3-266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage syn9
[NCBI] 		382359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 8012
[NCBI] 		166313 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_717705.1 [NCBI]
Genbank nucleotide accession
NC_008296 [NCBI]
CDS location
range 30343 -> 31143
strand +
CDS
ATGAGTACTCTAAAAGTTGCTGCAATTAAGGATCTATCGAATGCTGTAGGTTTTACTTTTAGCTCGGGATCTGTTGCTGCAAACCAAACATTAATTGTTAATGATATTACCATCAATGGTACTATCTCTGGCAATTCCAATTCTTACTTACCCTCTCAGAGTGGTAATTCAGGTAAGGTGCTGTATACTGACGGCACGACTGCATATTGGGGCACTTCACCTTCTACAGAAAACATTTCTAGTATGCAGGTGTTTACCTCTAGTAGCACTTGGAATAAACCATCTGGTGTAAAATACATCAAAGTCCAAGTCTGTGGTGGTGGCGGTGGAGGATCTGGTCACGGTGAATCTGGTGGTGCTGGCGGATATTCGGAGAAGATTATCAATGTCCAAAGCATTTCTTCTGTCACAGTTACTGTCGCTGGTGAAGTTAACGGTACTTATTACCGAGGAGGAGCATCCAATGGCAACGGATCTTCTTTTGGATCTTATTGCTCTGCTTCTGGCGGATATGGTGCTAATAGAAACAATCAGCATTCTGGTGGACTTGGAGGGGTTGGATCAGGTGGAGATTTAAATATCTACGGTGGTGGTGGTCAATCACACCACAACTATTCTTCTGTTGGTGGATCTTCCTTCTTTGGTGGTGGTGTTGCTGCTGGACACCCTCAAGGTGGTAACTTCTCGCACAATCACCAGACACATTCCCCGCCAGGATCTGGTGGGTCTGGTGGTTACTTCCATAATCATCGTGGATCTAATGGTCGTCCTGGAATTGTTATTGTTACTCACTTCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
344240804a5a8c89bc3578bfab6c71912a17d400710ef7a351b8c6f262174a95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8165
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage Syn9 Hendrix,R.W., Pedulla,M.L., Peebles,C.L., Pope,W., Houtz,J.M., Smith,A.L., Hatfull,G.F. and King,J.A. 2003-10 — GenBank