Protein

View in Explore
Genbank accession
QNO13270.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPDVKLSQLAAASAASVAAGAALWTMAGHILGLNMEYVGPKSFRVSSGSAWIPSLQQAIEVPTALTLSGLTLAANTWYHVYLFLNGTTPAIEAVTDAPAAPYSGTARAKTGASSRRYLGSFKTDASSNIIQFQVGTNDSFEYRIPANTQPLRCLSNGTATTRTTVSLAAAVPPTATAASLILTNTMSSGFGLLSVPGVAAELFGVPTAGGVGQFFDLVLSPSQTMDYRISSADSNGLYIDVRAFRIAR
Physico‐chemical
properties
protein length:248 AA
molecular weight: 25761,91990 Da
isoelectric point:8,75818
aromaticity:0,08468
hydropathy:0,23347

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage phiSHP3
[NCBI] 		2762285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNO13270.1 [NCBI]
Genbank nucleotide accession
MT872956.1 [NCBI]
CDS location
range 35842 -> 36588
strand +
CDS
ATGCCTGACGTCAAACTCTCCCAGCTCGCCGCCGCCAGTGCGGCCTCGGTCGCGGCCGGGGCCGCCCTATGGACGATGGCGGGCCACATCCTTGGCCTCAACATGGAGTACGTCGGTCCGAAGTCGTTCCGAGTTTCCAGCGGCAGCGCCTGGATTCCCTCGCTGCAGCAGGCTATCGAGGTTCCGACTGCGCTGACCCTCAGCGGCCTGACGCTTGCGGCCAACACGTGGTACCACGTCTATCTGTTCCTCAATGGCACGACGCCGGCGATCGAGGCTGTTACTGACGCCCCGGCTGCTCCTTACAGCGGGACCGCCCGCGCCAAGACCGGCGCCTCCTCACGCCGCTACCTTGGCAGCTTCAAAACCGACGCGTCCTCCAACATCATCCAGTTCCAGGTCGGTACGAACGACTCTTTTGAGTATCGAATTCCCGCGAACACGCAGCCCCTGCGCTGCCTGAGCAACGGCACCGCCACCACCCGAACCACGGTGTCTCTGGCAGCCGCAGTGCCTCCCACGGCCACTGCTGCCAGCCTGATCCTCACCAATACGATGTCGAGCGGCTTCGGTCTCCTCTCCGTGCCAGGCGTAGCAGCCGAGCTTTTCGGCGTGCCGACCGCAGGCGGTGTAGGTCAGTTCTTCGACCTTGTGCTGTCGCCCAGCCAGACAATGGACTACCGAATCAGTAGCGCTGATTCCAATGGGCTCTACATCGACGTCCGTGCTTTCCGTATCGCTCGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9b2a52d9d82238daaacdddbcaf234e1bc328ed9ab287ef58248de04d034c12d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8647
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Genomic analysis of phage phiSHP3, a new Transposable Bacteriophage Infecting Stenotrophomonas maltophilia Wu,H., Zhang,Y., Jiang,Y., Wu,H., Sun,W. and Huang,Y. 2021-04-12 — GenBank