Protein

View in Explore
Genbank accession
XAL80387.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MAPIVVTAQNPRRDFPDHSARAVACWADIAGVNGLGVIDVYSAFIKLGSPSELYIDMIHPNAEGHKVWLEVVKKALSDTPAYQFDKVAEPYSGPLRMNLIPNPAFVTWGVDVPALWEANAVTVTRDLTRRESFAYSVKVTCTDVHSPLLYVDLSDTLTASRGQWVTFAARVWRPSGISTNAGRLQISGSGMNTVTSRSKANEAENGWMWAVCHAFVPKGATSLQARFLGGTVVGDSFNVDRVWFGIGKVPSDIDFMGQPAVTLADYYQAENVGVPVGYDTQVSVDGNHIVATPVTSKARFFININYLTPGQTYRVTWSKASPADGYAYARSSGGGLGAVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINPLDVTIASIVKV
Physico‐chemical
properties
protein length:382 AA
molecular weight: 41098,05820 Da
isoelectric point:6,30813
aromaticity:0,09948
hydropathy:0,03429

Domains

Domains [InterPro]
IPR036514
STR
1–78
IPR036514 DC_0332
DC_0332
STR
1–61
DC_0332
SSF52266
STR
4–77
SSF52266
XAL80387.1
1 382
Architecture
STR
STR
STR 1-78 | STR 80-372 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAL80387.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,1784
Central domain 85 283 200 0,0621
C-terminal 284 382 98 0,9712
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage P39
[NCBI] 		3143894 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAL80387.1 [NCBI]
Genbank nucleotide accession
PP739164.1 [NCBI]
CDS location
range 37628 -> 38776
strand +
CDS
ATGGCTCCTATCGTCGTAACAGCACAGAACCCTCGCCGCGACTTCCCTGACCACTCTGCCCGCGCGGTAGCGTGTTGGGCCGATATAGCTGGTGTAAACGGACTTGGTGTTATTGACGTGTACTCTGCGTTCATCAAACTTGGCTCACCATCTGAACTGTACATCGACATGATTCACCCTAACGCTGAGGGTCATAAGGTATGGCTTGAAGTTGTGAAGAAGGCGCTTAGCGATACCCCAGCTTACCAGTTCGACAAGGTGGCCGAACCCTACAGTGGACCGCTTCGTATGAACCTAATCCCCAACCCTGCGTTTGTGACATGGGGTGTTGACGTTCCGGCGCTGTGGGAAGCCAACGCAGTGACTGTGACTCGGGACCTCACCCGTCGTGAGAGCTTTGCGTACTCAGTCAAGGTAACCTGTACCGACGTACACAGTCCGCTGCTCTACGTTGACCTCTCGGACACCTTGACCGCCTCTCGTGGCCAGTGGGTAACATTCGCTGCCCGAGTGTGGAGACCTTCTGGCATCTCAACGAACGCGGGCCGCCTTCAGATTAGCGGCAGTGGGATGAATACCGTAACGTCTCGCAGCAAGGCTAACGAAGCGGAGAACGGTTGGATGTGGGCAGTGTGCCATGCGTTTGTGCCAAAGGGGGCCACATCCCTACAGGCTCGCTTCTTGGGTGGTACTGTTGTGGGTGATTCCTTCAACGTTGACCGTGTGTGGTTCGGTATTGGCAAGGTACCTAGCGACATCGACTTCATGGGTCAACCAGCGGTAACTCTGGCAGATTATTACCAAGCCGAGAACGTTGGGGTACCTGTGGGCTATGACACTCAGGTGTCCGTAGATGGTAACCATATTGTGGCAACCCCTGTAACCTCAAAGGCGCGATTCTTCATCAACATTAACTACCTGACTCCGGGCCAGACCTACAGGGTCACTTGGTCCAAAGCATCCCCGGCTGATGGGTATGCTTACGCCAGGTCGTCTGGGGGTGGCCTTGGTGCGGTTCTGGATACTGTTCGTCTATCTGCTGGGACCACGAGTACGTTTGTGGCACCGTCTAAGACCTGCTCGTTCGTAATGGAGTCCGACGGTATAAACCCGCTCGATGTAACCATCGCGTCAATCGTCAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
58ae94a9eeb1cd77bf0a73b0a74eea525737c31781f64f12c4b2f00238ad3716
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8415
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50