Protein

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Genbank accession
QXV80895.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,62
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGGSGDLGQAPLIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVVQKNTKSVNLQNYNPKQDGLINVRGGQYGRELIIHINGKDVAKYKIPDGSKPEHVNNTDAQWLAEELAKQMRTNLSGWTVNVGQGFIHVAAPSGQQINSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYIVKIVGDSSRSADQYYVRYDAERKVWVETLGWDTENQVLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSNINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRISILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSFTSIYRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFIYKFLYLNEELRQQSWSHWDFGANVQVLACQSIGSDMYVILRNEFNTFLAKISFTKNAIDLQGEPYRAFMDMKVRYVIPSGTYNDDTFTTSIHIPTIYGANFRRGKITVLEPDGKIAIFEQPTAGWNSDPWLRLNGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSPEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 89248,97230 Da
isoelectric point:6,41783
aromaticity:0,11965
hydropathy:-0,37557

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
QXV80895.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV80895.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9914
Central domain 143 349 208 0,1591
C-terminal 350 794 444 0,1564
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-349
C-terminal
350-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JeanTinguely
[NCBI] 		2852036 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV80895.1 [NCBI]
Genbank nucleotide accession
MZ501081 [NCBI]
CDS location
range 28083 -> 30467
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTCTGGTTTTCCTTAAGACACTGGGAGGAAGCGGTGACTTAGGGCAAGCACCTTTAATCCACTTGATTAACCGTGATGAGAACGAACAGTATTACGCTGTGTTCACTGGTACAGGAATCCGTGTGTTTGACCTTGCTGGTAACGAGAAGCAAGTCAGGTATCCTAACGGTTCCAACTACATCAAGACCGCTAATCCACGTAACGACCTGCGAATGGTTACTGTAGCAGACTATACGTTCATCGTTAACCGTAACGTTGTTGTACAGAAGAACACAAAGTCTGTCAACTTACAGAATTACAACCCTAAGCAAGACGGATTGATTAACGTGCGTGGTGGTCAGTATGGTAGGGAACTAATTATACACATTAACGGTAAAGACGTTGCTAAGTATAAGATCCCAGATGGTAGTAAGCCTGAACACGTAAACAATACGGATGCCCAATGGTTAGCCGAAGAGTTAGCCAAGCAGATGCGCACTAACTTGTCTGGTTGGACTGTAAATGTAGGGCAAGGGTTCATCCATGTGGCCGCACCTAGCGGTCAACAGATTAACTCCTTCACTACTAAAGATGGATACGCAGACCAGTTGATTAACCCTGTGACCCACTACGCTCAGTCGTTCTCTAAGTTGCCACCTAATGCTCCTAACGGCTACATTGTGAAAATCGTAGGGGACTCCTCTAGGTCTGCCGACCAGTATTACGTTCGGTATGACGCTGAGCGGAAAGTTTGGGTTGAGACTTTAGGTTGGGACACTGAGAACCAAGTTCTATGGGAAACCATGCCACACGCTCTTGTGCGAGCCGCTGATGGCAATTTCGACTTCAAGTGGCTTGAGTGGTCTCCTAAGTCTTGTGGTGACGTTGATACCAACCCTTGGCCTTCTTTTGTTGGTTCAAATATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGATTCCTTAGTGGGGAGAACATCATATTGAGCCGTACAGCCAAATACTTCAACTTCTACCCTGCGTCCATTGCTAACCTTAGTGATGACGACCCTATAGACGTAGCTGTGAGTACCAACCGAATATCAATCCTTAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCAGACGAAGCACAGTTCGTTCTGACAGCGTCCGGCACCCTTACATCGAAGTCTGTTGAGTTGAACCTGACGACTCAGTTTGACGTGCAGGACAGAGCGAGACCTTATGGGATTGGGCGTAATGTCTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATTTACAGATATTACGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCGCACGTTCCTAACTACATCCCTAATGGTGTGTTCAGCATTTGTGGTAGTGGTACTGAAAACTTCTGTTCTGTGCTATCTCACGGGGACCCAAGTAAAATCTTCATTTACAAATTCCTGTACCTGAACGAAGAGTTAAGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGCAAACGTGCAGGTTCTGGCTTGTCAGAGCATCGGCTCGGATATGTACGTTATTCTTCGCAATGAGTTCAATACGTTTCTAGCTAAAATATCCTTCACTAAGAATGCCATTGACTTACAAGGTGAACCCTATCGTGCCTTTATGGATATGAAGGTTCGCTACGTGATTCCTAGTGGAACATACAACGATGATACCTTCACTACCTCTATCCACATTCCAACAATCTATGGCGCAAACTTCAGGAGAGGCAAAATCACTGTATTGGAACCTGATGGTAAGATAGCCATATTTGAGCAACCTACTGCTGGGTGGAATAGTGACCCTTGGCTGAGACTCAACGGTAACTTAGAGGGACGAACGGTGTACATTGGGTTCAACATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGATGGGTCTACATCCCCGGAAGACATTGGTCGCTTACAGTTACGCCGAGCGTGGGTTAACTACGAGGAATCTGGTACGTTCGATATTTATGTTGAGAACCAATCGTCCAACTGGAAGTATACAATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTGGGTAACGCCAAGTTCAATACCGTGTCCATCTTGTCTGATGAGACTACCCCACTGAACATAATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2ee003eb718f0a99b082f671da65dc2f407432d1239872e7c4450608c3247bd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3259
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank