Protein

View in Explore
Genbank accession
QMP81488.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MTEMPKDALFFMNWFEKEYPEFVNQYGQVKGFYDQSSDEFQIEEIQDAYIERKKGNEPLPMYFGDSGQFR
Physico‐chemical
properties
protein length:70 AA
molecular weight: 8466,30340 Da
isoelectric point:4,32735
aromaticity:0,20000
hydropathy:-0,92571

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_APEC
[NCBI] 		2759186 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli APEC O78
[NCBI] 		1274814 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP81488.1 [NCBI]
Genbank nucleotide accession
MT664721.1 [NCBI]
CDS location
range 21430 -> 21642
strand +
CDS
ATGACTGAAATGCCAAAAGATGCCTTGTTCTTTATGAACTGGTTTGAAAAAGAATATCCAGAATTTGTAAATCAGTATGGTCAGGTCAAAGGATTTTATGATCAATCCTCTGATGAGTTCCAGATTGAGGAAATACAGGATGCATATATCGAAAGAAAGAAAGGCAATGAGCCGTTACCCATGTATTTTGGCGACAGTGGTCAGTTTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90fca197b674934b5554b665a64b0476ff0d9dd4821a744e6ee1beba2158b798
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8458
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Activity Analysis of Broad-Spectrum Endolysin from a Novel Phage Infecting Turkey Pathogenic Escherichia coli APEC O78 Deng,S.S. 2021-05-31 — GenBank