Protein

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Genbank accession
XXJ62755.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAELRSTTAIGGNIVWHGGNLRFDPQGDTILYQGYKIYTEFDTPLPGELGNGGTTSAYTKTESNALFAPIHAGGYVKKDGDTMTGKLTNSANEIEINGTSPRLLLKETDATNKQWFVIADNSTLSIREDTTATTRMRIATDNLNLNLSNLDMNDKTTIRSFDSWLRINDQAAYVTGVYFGSSLVRTDGTFQISNGDTFNVNASVFTYKGGNVFHDAYHPNADKWTTARTLTLAGDATGSVSIDGSSNATLTVAVVNDSHTHDGRYYTETEADSRFANVTGDTFTGNVAISKAGGRLSFNETDYVNTNSGINWITSAGQNLELVHEITDGELNTTGGNGQALQIRSNGGTVAQAGLEVEGEIFAKVNQRVFHDAYHPNADTWTTARTITLAGDLSGSVSINGGSNVTLTATVANDSHTHDGRYYTESESDARYVNIGGDTMTGNLTMGSNLVNFKSGGDVTLPNILGIRSSIDLNSRLFTNEGGLSYTTYESSTANRPSGVTNNANGVITINTHTGAYNHQLSFNSSGQVHHRSGTGSWSRLFADNYHPNADKWTTARTITLAGDLTGSVSIDGSANVTLSAEVTNDSHTHNRLNPMNANWNSQTQEFRTGTTSAPAGSGVSSFLNWIQWGHNGGSKYRHTLYSFADNAAMAQLWYAYKNNTSDTTSAATKQRIFMDNYHPNADTWTTARTLTLAGDATGSVSINGGSNVTLTVAVANDSHTHDGRYYTESESNSRFAQNSEFSTGATFATIAGKYLPKVTTSGVLEMGRYIDFHTTDSTADYDIRLDCNSSGSLSVVGGTLNGSFVGSLSGNASTASWADTVDVNTSTSTAFFGLVWHSGDTLYASENQGLTVRPSDGFTKIKHGYLCNERLQFDTTGRIYPRTTGQRRSGMYGIYDSTKIGHIWSMGSGFMIADDGSTFGNMYGFAYKHTNNATGGNMAGGHQAVWCINGVGKSSIGENIWTAGNVTAYSDIRVKTNIERIDNPLEKVSKISGYTYDRTDQECPRQTGVIAQEILEVLPEAVMGGPTDDDPEGHYSVAYGNLVGLLIEATKELNEKIETLQSEVQELKRPWWKKLLRL
Physico‐chemical
properties
protein length:1079 AA
molecular weight: 116407,84520 Da
isoelectric point:5,35920
aromaticity:0,08990
hydropathy:-0,45867

Domains

Domains [InterPro]
DC_0056
ATT
1–348
DC_0056 DC_1028 IPR030392
IPR005601
STR
208–249
IPR005601 DC_1451 IPR005601 DC_1028
IPR030392
CHP
971–1023
IPR030392 Coil
XXJ62755.1
1 1079
Architecture
ATT
STR
ATT 1-348 | STR 349-1079
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ62755.1
1 1079
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,9230
Central domain 24 268 246 0,1704
C-terminal 269 1079 810 0,8386
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-268
C-terminal
269-1079

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CZ01
[NCBI] 		3435809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ62755.1 [NCBI]
Genbank nucleotide accession
PV740454 [NCBI]
CDS location
range 78715 -> 81954
strand -
CDS
ATGGCAGAACTAAGATCTACTACTGCAATTGGCGGTAATATAGTCTGGCACGGAGGAAATCTTCGCTTTGACCCTCAGGGCGACACGATTCTGTACCAAGGCTACAAGATATACACAGAATTCGATACACCGCTGCCAGGCGAACTAGGCAATGGTGGGACTACTTCTGCGTATACGAAAACTGAATCTAATGCTTTATTCGCTCCGATTCATGCTGGCGGGTATGTCAAGAAAGACGGCGATACGATGACAGGCAAGCTGACAAACTCAGCTAATGAAATCGAGATTAATGGCACATCACCGCGTCTGTTATTGAAAGAAACTGATGCAACGAACAAACAATGGTTTGTGATTGCTGATAATAGCACGTTGAGTATTCGTGAGGATACAACTGCTACGACTAGAATGCGCATTGCAACTGACAATTTGAATTTGAACTTGTCGAATCTTGATATGAACGACAAGACAACGATTAGAAGTTTCGATTCTTGGTTGAGAATTAATGACCAAGCTGCGTACGTTACGGGGGTGTATTTCGGGTCTTCTCTTGTTCGCACTGACGGGACATTTCAGATTTCAAATGGAGATACGTTCAATGTAAATGCTTCTGTGTTCACATACAAGGGAGGCAACGTTTTCCATGACGCATATCACCCAAATGCTGATAAATGGACAACTGCTCGTACACTGACATTAGCTGGTGATGCAACAGGGTCTGTGTCAATTGATGGGTCATCAAATGCGACACTGACAGTTGCAGTTGTAAACGATTCTCATACGCACGATGGGCGTTACTACACTGAAACAGAAGCAGACTCACGCTTTGCTAATGTGACAGGTGATACGTTCACTGGTAATGTTGCTATTAGTAAGGCAGGCGGGCGTCTTAGCTTTAATGAAACTGACTACGTTAACACTAATTCTGGTATTAACTGGATTACATCCGCGGGACAAAATCTTGAACTTGTTCATGAAATAACTGACGGTGAGCTTAACACAACTGGCGGTAATGGACAAGCACTTCAGATTCGTTCTAATGGTGGTACTGTTGCTCAGGCTGGCTTGGAAGTTGAAGGTGAGATATTTGCAAAAGTCAATCAGAGAGTATTCCATGATGCGTATCATCCAAATGCAGACACGTGGACAACTGCTCGTACGATAACACTTGCAGGGGATCTATCTGGCTCTGTATCAATCAATGGCGGGTCTAACGTAACGCTGACTGCTACAGTTGCTAATGACTCTCACACGCACGATGGTCGTTACTACACTGAATCAGAATCTGATGCTCGTTACGTGAATATTGGTGGCGACACGATGACTGGAAACTTGACTATGGGTTCAAACTTAGTCAACTTCAAGTCTGGTGGTGATGTCACATTGCCTAATATACTAGGTATTCGCTCTTCGATTGATTTGAATTCACGTCTATTTACAAATGAAGGTGGGTTGTCATATACGACGTATGAATCATCGACTGCAAACAGACCTAGTGGCGTGACAAACAACGCGAATGGTGTAATCACGATTAATACACATACTGGTGCGTATAATCATCAGCTATCGTTCAACTCATCAGGTCAGGTGCATCATCGTAGCGGTACTGGATCGTGGTCTCGATTGTTCGCAGACAACTACCACCCAAATGCTGATAAATGGACAACTGCTAGAACTATTACATTAGCTGGTGACTTGACTGGTTCAGTGTCAATCGACGGTAGTGCAAATGTTACATTATCGGCTGAGGTTACTAACGATTCGCACACTCATAATAGATTGAATCCAATGAACGCCAACTGGAACTCGCAAACGCAAGAGTTCCGTACTGGTACAACTAGCGCACCTGCTGGCTCGGGAGTGTCGAGTTTCTTGAACTGGATTCAATGGGGTCATAACGGTGGTTCGAAGTACAGACATACACTGTATTCATTTGCTGATAACGCAGCTATGGCGCAATTGTGGTATGCGTACAAGAACAACACGTCTGATACGACATCGGCAGCAACAAAACAACGTATCTTCATGGATAACTATCATCCAAACGCAGACACGTGGACAACTGCTCGTACTCTGACATTAGCTGGTGATGCAACTGGGTCTGTATCAATAAACGGCGGATCTAACGTTACTTTAACAGTTGCTGTTGCTAACGACTCTCACACGCATGATGGTCGTTACTATACTGAATCTGAATCAAACTCTAGATTCGCCCAGAATAGTGAATTTTCAACAGGTGCAACATTTGCTACTATTGCAGGTAAGTATTTGCCTAAAGTAACGACTTCAGGCGTGCTTGAAATGGGTAGATACATTGACTTCCATACTACTGATAGCACAGCAGATTACGATATTCGTCTGGATTGTAATTCAAGCGGAAGTCTAAGTGTTGTTGGTGGTACTCTAAATGGTAGTTTCGTTGGGTCACTAAGCGGTAATGCATCGACTGCATCATGGGCTGATACGGTAGATGTTAACACAAGTACATCAACTGCCTTCTTCGGACTTGTTTGGCACTCTGGTGATACATTGTATGCATCTGAGAACCAAGGTCTTACAGTGCGTCCTAGCGACGGATTTACTAAGATCAAACACGGGTATCTGTGTAATGAACGTCTGCAATTTGATACAACTGGTCGAATTTACCCACGTACGACGGGTCAAAGACGTTCTGGGATGTACGGAATCTATGATTCAACAAAGATCGGACATATCTGGTCGATGGGTTCGGGGTTCATGATCGCAGATGACGGTTCGACTTTCGGCAATATGTATGGGTTTGCTTATAAGCATACAAACAACGCGACTGGCGGTAATATGGCTGGCGGACACCAAGCTGTTTGGTGTATCAATGGCGTTGGAAAATCTTCGATAGGTGAAAACATCTGGACTGCGGGTAACGTAACTGCGTACTCTGATATTCGAGTCAAGACAAATATCGAGCGAATTGATAACCCACTTGAGAAAGTTTCGAAAATAAGTGGTTACACTTATGACCGTACTGATCAAGAATGTCCACGTCAAACTGGTGTGATTGCTCAAGAGATTCTTGAAGTTTTACCTGAAGCTGTAATGGGTGGCCCTACAGATGATGACCCAGAGGGGCATTATTCGGTAGCGTACGGGAATCTAGTGGGTCTTTTGATTGAAGCTACTAAAGAGCTTAATGAAAAGATTGAAACGCTTCAGAGCGAGGTACAAGAGCTTAAACGCCCTTGGTGGAAGAAATTGTTAAGATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14d18c76f4207040480ff9314c011de27b0da2324271b4e3f46465b6e7059697
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6068
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage CZ01 Zhu,L. and Zhu,D. 2015-12 — GenBank