Protein

Genbank accession
YP_009043911.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MASILTTVGRNKLASATPEQQLTISHIAVGDGNGDFPPLNPSMTSLVNEVWRGAASQPIRTADLGTLIFEGFIPGNIGGFFIREIAIFDNTGAMIAIGQTSVVEKPDPSSGSVVTIAPRLHVKLDNADQVDLIVQDVPYIDHAGLSNRSAADSHPATAISVDALPAIGFNNPTTVQAALSALKSAATKESQSSKTDAAANKLMLTGAFGLGGEAIASSNWNNITVSGFYTNSTSNQAELPIAALPLSLIHIQAGTNATQICGRTASDEPQMWRRSKQNGTWGAWVEFADQRYRFISDANLAVKSGLYSLPISAGALNAPVPNASGTLLVIQGGSGENFVSQMWTQSSDLTAERVFVRHKTSSGWTDWVEVYHTGNLPEVTQGEAEGTSSALRAWSPLRVRQAIEAWARTVNDEVGVVKYFISTVTPTGRYIKANGAAVSRTAYADLFAKVGTFWGAGDGSTTFNVPDLRGEFIRSWDDGRGIDAGRAFGSTQNENTPSDTMYRINNISPAFSFANGPMVSGSLITNATFKQANTGDNRPRNVALIAWIGY
Physico‐chemical
properties
protein length:550 AA
molecular weight: 58409,51020 Da
isoelectric point:5,59650
aromaticity:0,08182
hydropathy:-0,12800

Domains

Domains [InterPro]
IPR022225
3–134
IPR022225 cd19958 cd19958 IPR037053
SSF88874
414–548
SSF88874
IPR011083
415–473
IPR011083
YP_009043911.1
1 550
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage X29
[NCBI] 		1500713 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009043911.1 [NCBI]
Genbank nucleotide accession
NC_024369 [NCBI]
CDS location
range 20275 -> 21927
strand +
CDS
ATGGCTTCAATTTTAACTACCGTGGGGCGCAATAAGCTGGCTAGTGCAACGCCAGAGCAGCAACTCACTATCAGTCACATTGCGGTTGGTGATGGCAATGGCGATTTTCCACCGTTAAACCCTTCAATGACTTCATTGGTTAATGAGGTTTGGCGCGGAGCGGCATCACAACCAATTCGAACAGCCGATCTCGGAACGTTGATTTTTGAGGGGTTCATTCCCGGAAATATTGGCGGGTTTTTCATCCGAGAAATCGCGATTTTTGATAACACTGGCGCAATGATTGCCATCGGACAAACTTCAGTTGTTGAAAAACCTGATCCATCATCGGGTTCAGTTGTAACAATTGCCCCACGTCTGCACGTCAAATTAGATAATGCCGATCAGGTCGATCTTATCGTTCAGGATGTTCCATACATCGATCACGCAGGATTAAGCAACCGATCTGCCGCTGACTCTCACCCTGCAACTGCAATTAGCGTTGATGCGCTTCCGGCGATTGGGTTCAATAACCCAACAACGGTACAAGCTGCCTTGTCAGCGCTGAAATCAGCGGCCACAAAAGAAAGTCAGAGCTCAAAAACAGATGCAGCAGCAAACAAGCTAATGCTGACTGGGGCTTTTGGACTTGGCGGAGAGGCCATTGCAAGCTCTAACTGGAATAACATCACAGTAAGCGGCTTTTACACAAACTCAACCAGCAATCAGGCTGAATTGCCGATTGCTGCACTCCCTCTTTCTTTGATCCACATTCAGGCAGGAACCAACGCGACTCAGATTTGCGGACGAACAGCAAGTGATGAGCCGCAAATGTGGCGGAGATCAAAGCAAAACGGCACTTGGGGCGCTTGGGTTGAATTTGCCGATCAGCGCTATCGATTCATTTCAGATGCAAACCTTGCGGTAAAATCAGGCCTGTACAGCCTGCCGATTTCTGCTGGCGCGCTTAATGCCCCGGTTCCTAACGCAAGCGGCACTCTGCTGGTTATTCAAGGCGGATCTGGCGAAAACTTCGTTAGCCAGATGTGGACGCAATCAAGCGATCTCACTGCTGAGCGCGTTTTTGTCCGGCACAAAACCAGCAGTGGCTGGACGGATTGGGTTGAGGTTTATCACACCGGAAACTTGCCAGAAGTAACCCAAGGTGAGGCAGAGGGAACATCATCAGCTTTGCGTGCTTGGTCACCGCTTCGAGTTCGGCAGGCTATTGAAGCTTGGGCGCGGACTGTAAACGATGAAGTTGGTGTGGTTAAGTATTTTATTTCAACCGTTACCCCAACAGGCCGATACATTAAAGCCAACGGGGCCGCGGTAAGCCGAACTGCTTACGCTGATTTGTTTGCGAAGGTCGGCACGTTTTGGGGCGCTGGCGATGGCTCAACTACGTTCAACGTGCCAGATCTGCGCGGCGAGTTCATCCGCTCATGGGATGATGGGCGCGGCATTGATGCTGGACGTGCGTTTGGTTCAACGCAAAATGAGAATACGCCTAGCGATACAATGTACCGTATCAATAACATATCTCCGGCTTTTAGTTTTGCGAACGGCCCAATGGTTTCTGGGTCGCTCATTACTAACGCAACATTCAAACAAGCTAACACTGGTGATAATAGACCACGCAACGTAGCTTTAATCGCTTGGATTGGATACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
119a6e215d08068a35bb29d3abdc173ab418b78c4f74c14646b8f5c96b752273
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7767
Evidence 0,7767
Download PDB

Literature

Title Authors Date PMID Source
Whole genome sequencing of Vibrio cholerae bacteriophage X29 Bhandare,S.G., Warry,A., Emes,R.D., Hooton,S.P.T., Barrow,P.A. and Atterbury,R.J. 2017-11-16 — GenBank