Protein

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Genbank accession
QBP06149.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MADVNISALPVITASTNDDYFIINDANSTTSIIDWEDLKASIDKLTGQITYDTGSEAAPSIAFDLDTDTGIYSPGLGQVSVVTNGDTRVYVDANGNVGIGNEIPSSFNSATNDVVIGAGLTDSGLTCYSASGSAGSVTFADGTAGGASIAGQISYYHVDDHLAFYTNAAEVARFTSDGKFGLGTTDPQEVLHVTNGSSGTTGTITGVSGLIVEAVAGTESAIQLHSSATDSSGIYFGDPGRLDAGFVKYDHNDDSFKIQVNGIPILNINSNGRLGLNTSATNQMLSLNGPATGDATLIGFEASSVIQGDVTTDFRYYKTAAETADATFTLTDLYHYSATEDAFGASSTVTNQYGFHVEAALTGATNNYAYYSALTGINNYAFYASGNANNYFNGNSFKVAVGGSDKFEVDNTGLVTIAETLKMEPGSTAERPTGEAGMFRYNSDEGSFEGHDGTSWAVFNRQGDTLVEMSATAPSNPNVGDIWYNTDLGNTYIYYFDGDSNQWVESSPSAAGGLFPDTVNSAAIVDLSVINSKYANNSISANKLQNGAVEPAKMSTGAPSWNTSGDTIISAAGQGLILTSPNGTQYRLTVDNSGNLSTTAV
Physico‐chemical
properties
protein length:601 AA
molecular weight: 62537,91620 Da
isoelectric point:4,06827
aromaticity:0,09484
hydropathy:-0,17854

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP06149.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 288 288 0,2882
Central domain 289 487 200 0,4340
C-terminal 488 601 113 0,5504
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-288
Central
289-487
C-terminal
488-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B68
[NCBI] 		2545437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP06149.1 [NCBI]
Genbank nucleotide accession
MK016664.1 [NCBI]
CDS location
range 113955 -> 115760
strand +
CDS
ATGGCTGATGTAAATATCAGTGCGCTTCCAGTAATCACTGCGTCAACTAACGACGACTACTTCATTATCAATGATGCTAACTCAACCACTAGCATCATTGATTGGGAAGACCTGAAAGCGTCTATCGACAAACTGACGGGTCAGATCACCTATGATACTGGATCGGAAGCGGCACCTTCGATCGCCTTTGATCTGGATACCGATACTGGTATCTACAGCCCCGGTCTGGGTCAGGTCTCCGTTGTAACAAACGGCGACACCAGAGTGTATGTTGACGCCAACGGCAACGTCGGTATTGGTAACGAGATTCCCTCTAGTTTTAACTCCGCCACCAATGACGTTGTTATCGGCGCTGGTCTCACTGACTCCGGTCTGACTTGTTACTCCGCGTCTGGAAGCGCCGGATCTGTAACGTTCGCCGATGGTACCGCCGGTGGCGCTTCGATCGCCGGTCAGATCAGTTACTACCACGTTGATGACCACCTGGCGTTCTACACCAACGCTGCTGAAGTTGCCCGTTTCACCTCCGACGGTAAGTTTGGTCTGGGTACGACCGATCCCCAAGAGGTTCTACACGTCACTAACGGATCTTCTGGTACCACGGGTACTATCACCGGTGTAAGTGGTCTTATCGTCGAAGCAGTCGCAGGTACAGAGTCCGCAATTCAGTTACACTCCAGTGCTACCGATTCCTCCGGTATCTACTTCGGTGACCCAGGTCGTCTCGATGCTGGTTTCGTTAAGTACGACCACAACGATGACTCCTTCAAGATTCAGGTTAATGGTATTCCCATCCTGAATATCAACAGCAACGGCCGCCTTGGTCTCAACACCTCGGCAACTAACCAGATGCTGTCCCTGAACGGGCCTGCAACTGGCGACGCTACCCTTATCGGTTTCGAAGCATCCTCGGTTATCCAAGGTGACGTAACCACCGACTTCCGCTACTACAAGACCGCCGCAGAGACCGCTGACGCGACCTTTACACTCACCGACCTCTACCACTACAGCGCAACCGAAGACGCCTTTGGTGCCTCTTCTACCGTAACCAACCAGTATGGTTTTCACGTCGAAGCAGCACTGACTGGAGCAACCAACAACTACGCATACTACAGTGCCCTGACCGGTATCAACAACTATGCGTTCTACGCTTCGGGCAACGCAAACAACTATTTCAACGGTAACAGTTTCAAGGTTGCTGTTGGTGGTAGCGATAAGTTCGAAGTCGATAACACGGGTCTGGTAACCATCGCCGAGACCCTCAAGATGGAACCAGGATCAACCGCAGAGCGCCCCACGGGTGAAGCGGGTATGTTCCGCTATAACAGCGACGAAGGATCCTTTGAGGGGCACGACGGCACCAGTTGGGCAGTCTTTAACCGCCAGGGGGACACCCTGGTTGAGATGTCCGCCACGGCACCATCCAACCCCAATGTTGGTGACATCTGGTACAACACCGATCTCGGCAACACCTACATCTATTACTTCGACGGCGACAGCAACCAGTGGGTTGAGTCTAGTCCCTCTGCTGCGGGTGGGCTCTTCCCCGATACGGTGAACTCTGCCGCTATCGTTGATCTCTCCGTCATCAACTCTAAATACGCCAACAACTCCATCAGCGCTAACAAGTTGCAGAATGGTGCAGTTGAACCCGCGAAGATGAGCACCGGTGCTCCTTCCTGGAACACAAGTGGCGACACCATTATTAGTGCCGCTGGTCAAGGTCTTATCCTGACTTCCCCCAACGGAACTCAATATCGACTGACTGTCGATAACTCCGGCAACCTATCGACGACTGCCGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ed38fab91fbf847865aa2576656b7bd98617a88a20f209ffbbd099d720635aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank