Protein

View in Explore
Genbank accession
WNL50949.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNFKKWFKEWYYEWFVGHQLYERRLEVTTQFKDAIFRLGKPFGDFPDAPTSLGDWNPMNVLNIAENMLLLQNTDGSWDKNLPIRSKFEPEEVKEIFLYGKYKNRGNLDNGANWKHLRLLATVYNVTKAERYRESASKCLDWILSQQHPVSGSWMNANHPYITYNDDVTQGVLVTFQDILTNDYGDYDWVSEQKLKEVEDSYLRGIDCVLKTQHRSGGWAQQHSHETLEPCWARSYEGPWLATRESATVCRMLDRHLRYVPYMYAEDVETAVHRCKFWLTLTRLSNGSWPRFLFPGTTTPVFCDREGNIYKTWEELPEERRYGYGWFVSSPWEAL
Physico‐chemical
properties
protein length:334 AA
molecular weight: 39587,06620 Da
isoelectric point:5,89900
aromaticity:0,15269
hydropathy:-0,66377

Domains

Domains [InterPro]
G3DSA:1.50.10.20
STR
48–334
G3DSA:1.50.10.20
G3DSA:1.50.10.20
STR
55–334
G3DSA:1.50.10.20
SSF81853
Unmapped
60–332
SSF81853
IPR012669
ENZ
71–326
IPR012669
WNL50949.1
1 334
Architecture
STR
STR 48-334
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL50949.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 17943 -> 18947
strand +
CDS
ATGAATTTTAAGAAGTGGTTCAAGGAATGGTATTATGAGTGGTTCGTGGGGCACCAACTCTACGAGAGAAGACTAGAAGTAACCACACAGTTCAAGGACGCTATCTTCAGGTTGGGTAAACCTTTCGGTGACTTTCCTGACGCACCAACTAGTCTTGGTGACTGGAATCCTATGAACGTTCTGAATATTGCAGAGAACATGCTTCTGCTTCAGAACACAGACGGTTCTTGGGATAAGAACTTACCCATCCGTTCTAAGTTTGAACCTGAAGAAGTCAAAGAGATCTTTCTGTATGGTAAGTATAAGAACCGAGGTAACCTAGACAACGGTGCTAACTGGAAACACTTGCGTTTGCTCGCTACTGTATACAACGTCACCAAGGCTGAGAGGTATCGCGAGTCTGCTAGTAAGTGCCTTGACTGGATTCTTTCACAGCAGCACCCAGTCTCCGGTTCCTGGATGAACGCCAACCACCCATATATTACTTACAACGACGACGTAACCCAGGGGGTTCTTGTCACCTTCCAAGATATTCTCACCAACGACTACGGTGACTATGACTGGGTTAGTGAACAGAAGCTGAAAGAAGTTGAGGACTCTTACCTTAGAGGTATTGATTGTGTATTGAAGACACAACACCGCAGTGGTGGTTGGGCGCAACAACACTCCCACGAGACCTTGGAACCTTGCTGGGCAAGGAGTTATGAAGGTCCCTGGTTGGCAACACGAGAGAGTGCAACTGTCTGTCGTATGCTTGACCGTCACCTCAGATATGTTCCTTACATGTATGCTGAGGACGTTGAAACTGCGGTTCATCGCTGTAAGTTCTGGTTGACACTGACACGCTTAAGCAACGGATCATGGCCACGGTTCTTGTTCCCTGGTACAACAACTCCTGTATTCTGTGACCGTGAAGGTAACATCTACAAGACGTGGGAGGAGCTCCCAGAGGAACGCCGCTACGGTTACGGGTGGTTCGTTTCCTCACCGTGGGAAGCGCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5b4987aea1cbb3cfbcd2223b076cdffaeb1b4b5d6b3e4961b0189050e870183
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank