Protein

View in Explore
Genbank accession
USM81313.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPMEFVVSRIPDGVPVRVYLGEIGDDTDVTDDFDALKDEDAVYHIIEGAGSGALGAVSKVFGFILKPIAKLFGLNTAANANYTATNNQTTSPNNSLTDRSNKPRPYERSYDICGTVQTIPNDLMQTYKAFNSTGALLEYSYYDAGRGHLHIEADGVTEGDTLISDITGSSVAVYAPYTSPNNTASPQLQIGDVIDQKLYVTYSNDDVDGIVLKAPNDIGANPSADGTAKRISNTGYIYDPSGDSAFSEFLSVGDVAVLSNFDVKDVTNLNGSFEVLYVDDFEVRLYVGDIGNWGNLNNGETYALTERSDTFIGPSNTYDVSLTDWYYMVRGEVDQVLANVAGQNGLYKYDGGYNRTSVTVELQYQMIDSQRNPLSDIYTVQATITGNNTDYVGTSIYGQLPTASRFRARMRRVTNFDKDYDGTVSDEITFINLYGQSLDTTSHYGNRTTVHCARKQTPRAASIDNPELRMIATEMCYKYLGNGVFDTVMTPNTQAVQSLIRLARDPAVGNLELTTANMDKLLAVQEEIESYFGSELAGQFCYTFDDYDTTMQDIVQTIAEAVFCTAYRKGADIMLRFDRPVAGPEMVFTHRSKTTGTEKWTRTFNDSTTYDSLSFSYIDPDTNVQETIYIPEELGANTEEYESKGVRNYRQAYWLAWRRYQRNALSKVVVEFEATEEGALATPGGVISVVKGSRIAPQDGYVVAVNGLMLTLSQPVTFTPGDDHSIILKKRDGSVQSISVIKGSHDREVIMLSAPEEAIYTGNSALKTEFSFGNEARHNAQKIVVSSIDPGDDRTVKITGYNYDDGFYKYDGVAPYGSGFSDGFSNGFN
Physico‐chemical
properties
protein length:829 AA
molecular weight: 91313,84380 Da
isoelectric point:4,52657
aromaticity:0,10615
hydropathy:-0,36815

Domains

Domains [InterPro]
DC_0118
STR
1–661
DC_0118 DC_0808
NF040662
Unmapped
332–809
NF040662
USM81313.1
1 829
Architecture
STR
RBD
STR 1-661 | RBD 679-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-UTI89UKE1
[NCBI] 		2865825 Uroviricota > Caudoviricetes > Sarkviridae > Kagunavirus > Kagunavirus UTI89UKE1
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USM81313.1 [NCBI]
Genbank nucleotide accession
MZ234048 [NCBI]
CDS location
range 20999 -> 23488
strand +
CDS
ATGCCGATGGAGTTTGTCGTTAGTCGTATCCCTGACGGCGTGCCGGTGCGCGTCTACCTCGGTGAGATTGGCGATGATACAGACGTAACGGACGACTTCGACGCGCTTAAAGATGAAGACGCTGTGTACCACATTATTGAGGGTGCGGGTAGCGGGGCGCTCGGTGCGGTTAGTAAGGTGTTTGGTTTTATCCTTAAGCCAATCGCCAAGTTGTTTGGCCTGAACACGGCCGCCAACGCCAACTACACGGCGACTAACAACCAGACAACATCACCAAATAACAGCCTCACAGACCGCTCAAACAAGCCACGCCCTTACGAGCGCTCCTATGACATCTGCGGGACTGTGCAGACAATCCCTAATGACCTGATGCAGACGTATAAGGCGTTCAACTCCACTGGTGCTTTGCTGGAGTATTCGTACTATGACGCAGGGCGCGGACATCTGCATATTGAGGCTGATGGCGTCACAGAGGGCGACACCCTGATAAGCGACATCACAGGTTCATCTGTTGCCGTATATGCGCCGTATACGTCACCGAACAACACCGCATCTCCGCAACTACAAATCGGCGACGTCATTGACCAGAAACTCTATGTGACATACTCCAACGACGACGTTGACGGTATTGTGCTGAAAGCGCCAAACGACATCGGAGCTAACCCAAGCGCCGACGGCACAGCTAAACGTATTTCAAACACTGGCTACATCTATGATCCGTCAGGCGACTCTGCTTTTTCTGAGTTTCTTAGTGTTGGTGATGTCGCAGTGTTGAGCAATTTCGACGTTAAGGACGTCACTAACCTGAACGGCTCGTTTGAAGTTTTATACGTCGACGACTTTGAGGTTCGGTTGTACGTCGGGGATATAGGTAACTGGGGCAACCTTAATAACGGAGAGACTTACGCACTTACAGAGCGTTCGGATACGTTTATAGGCCCAAGCAACACCTATGACGTATCTCTTACGGACTGGTATTACATGGTGCGCGGAGAGGTTGACCAGGTACTTGCTAACGTTGCCGGGCAGAACGGCCTCTACAAATACGACGGAGGCTATAACCGCACCAGTGTAACGGTGGAACTCCAGTACCAGATGATTGATTCTCAGCGTAACCCGTTGAGCGATATTTACACGGTACAGGCCACAATTACAGGCAACAATACGGATTACGTCGGTACGTCTATCTACGGGCAATTGCCGACCGCGTCCCGTTTCCGCGCCCGTATGCGTCGTGTAACGAATTTTGATAAAGACTACGACGGAACGGTAAGCGACGAGATAACCTTTATCAACCTGTATGGGCAGTCACTGGACACTACCTCACATTACGGCAACAGGACAACGGTGCATTGCGCCCGTAAACAGACGCCGCGTGCCGCCAGCATAGACAACCCGGAACTGCGCATGATTGCAACCGAGATGTGTTACAAATACCTCGGCAATGGAGTATTCGATACAGTAATGACACCGAACACGCAAGCCGTACAATCTCTAATTCGACTGGCGCGCGACCCCGCAGTAGGCAATCTGGAACTGACAACGGCAAACATGGACAAGTTACTTGCTGTGCAAGAAGAGATTGAGTCCTATTTCGGAAGTGAATTAGCGGGGCAGTTCTGCTACACGTTCGACGACTACGACACCACGATGCAGGACATCGTTCAGACTATAGCGGAAGCCGTGTTCTGTACTGCGTACCGTAAAGGCGCGGACATTATGCTGCGTTTCGACCGTCCGGTTGCTGGGCCCGAGATGGTGTTCACCCACCGCAGCAAAACTACTGGTACAGAGAAATGGACGCGCACATTCAACGATTCTACGACCTACGATAGCCTGTCGTTCTCATACATCGACCCGGATACTAACGTACAGGAAACGATTTATATCCCGGAAGAACTCGGTGCAAATACGGAGGAATACGAATCGAAGGGCGTGCGCAACTACCGGCAGGCGTACTGGCTTGCGTGGCGTCGATATCAGCGCAATGCGTTAAGTAAAGTTGTCGTAGAGTTCGAAGCTACTGAAGAAGGTGCGCTCGCTACACCCGGCGGCGTAATCAGCGTGGTTAAAGGTTCACGTATTGCTCCGCAGGATGGTTATGTTGTTGCCGTTAATGGGCTTATGCTGACGCTGTCGCAGCCTGTTACGTTTACCCCTGGCGATGACCACTCCATCATTCTTAAGAAGCGCGACGGCTCTGTGCAGAGTATCTCTGTTATCAAAGGAAGCCACGACCGCGAAGTGATTATGCTTTCTGCCCCAGAGGAAGCAATCTACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGAAGATAGTTGTTTCTTCAATCGACCCTGGCGACGACCGCACGGTCAAGATTACTGGCTACAACTATGACGACGGATTCTACAAATACGACGGCGTCGCGCCATACGGCAGCGGTTTCTCCGACGGATTCAGCAATGGTTTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eee1d55529e30561b2c0aab7fa24c9a635db9f50122fc7d43ffa989f95253982
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3107
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank