Protein

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Genbank accession
YP_009795273.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTMTITKALATAKALDAKIERELPRLKFYAQTDGTGNFTKVAGYSNTVEDVTSQITGALQSVTDMISERAKIKAAIVASNAVTEVTIGQKVMTVAAAIEAKRSIGYEKQLLISMTKQKIQMDREHATRLEGFNKKLEDARAAAFGKDKKVSAEDIAMITQPIEVRSTPNVLDPIGLDARIKALQESIEDFELNVDFALSESNAKTTIEV
Physico‐chemical
properties
protein length:210 AA
molecular weight: 22883,99220 Da
isoelectric point:5,99909
aromaticity:0,04286
hydropathy:-0,19048

Domains

Domains [InterPro]
DC_0027
STR
1–210
DC_0027
Coil
Unmapped
181–201
Coil
YP_009795273.1
1 210
Architecture
STR
STR 1-210
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_V
[NCBI] 		2041492 Uroviricota > Caudoviricetes > Demerecviridae > Hongcheonvirus > Hongcheonvirus DUPPV
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009795273.1 [NCBI]
Genbank nucleotide accession
NC_047887.1 [NCBI]
CDS location
range 44579 -> 45211
strand -
CDS
ATGACTACTATGACAATTACTAAAGCACTGGCAACTGCAAAGGCACTGGATGCTAAAATTGAGCGTGAGCTTCCTCGTTTGAAGTTTTACGCACAAACAGATGGTACAGGTAACTTTACTAAGGTTGCGGGCTACTCTAACACCGTAGAAGACGTGACCTCCCAGATCACTGGAGCACTTCAAAGTGTTACTGATATGATTTCTGAGCGAGCTAAGATCAAAGCAGCTATCGTAGCCTCTAACGCAGTAACAGAGGTAACTATAGGTCAGAAGGTTATGACTGTAGCTGCTGCAATTGAGGCTAAGCGTAGCATTGGGTATGAAAAGCAGTTGCTTATCTCTATGACTAAGCAGAAAATCCAAATGGATCGGGAGCATGCTACTCGTCTGGAAGGCTTTAACAAGAAGCTAGAAGACGCTAGAGCAGCAGCTTTTGGCAAGGATAAGAAGGTATCCGCAGAGGATATTGCTATGATTACTCAGCCTATCGAGGTTCGTAGCACTCCTAACGTCCTAGACCCAATTGGTCTTGACGCTCGAATCAAAGCCCTTCAAGAGTCTATTGAAGATTTTGAGCTTAACGTTGACTTTGCCTTGTCAGAGTCTAACGCTAAGACTACTATCGAAGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
09b23bf8522a5e1e1c183e62a2ed00bc1d0ec47333b3653178f73cdd58ff9ddf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_V) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank